RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 VRK2Q86Y07 508 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 ANKRD13CQ8N6S4 541 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CIRBP-AS1Q8TBR5 109 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 FBXO25Q8TCJ0 367 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CKAP2Q8WWK9 683 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 NXNL1Q96CM4 212 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 RNF125Q96EQ8 232 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 C11orf24Q96F05 449 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CAPNS2Q96L46 248 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CPNE1Q99829 537 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZSCAN5AQ9BUG6 496 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CHAC1Q9BUX1 264 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 GPR174Q9BXC1 333 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CHIAQ9BZP6 476 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF665Q9H7R5 613 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 FAM212BQ9NTI7 297 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 RBM28Q9NW13 759 aaKnown RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 CPSF3Q9UKF6 684 aaKnown RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 DCHS2Q6V1P9 2916 aa-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 AHDC1Q5TGY3 1603 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-539P-201ENST00000516665 PLEKHH1Q9ULM0 1364 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 LRP1BQ9NZR2 4599 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 TTC21BQ7Z4L5 1316 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 IGHV5-10-1A0A0J9YXX1 117 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 LRRC72A6NJI9 287 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 YJEFN3A6XGL0 299 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 BTNL10A8MVZ5 291 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 LY6LH3BQJ8 138 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 PDE5AO76074 875 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 EIF2S1P05198 315 aaKnown RBP-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 IGHV1-8P0DP01 117 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 OTX1P32242 354 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 GCKP35557 465 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 TRIM23P36406 574 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 ASMTP46597 345 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 NAP1L1P55209 391 aaKnown RBP-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 HSPB3Q12988 150 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 TRIM14Q14142 442 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 NFE2L1Q14494 772 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF141Q15928 474 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 LYPLAL1Q5VWZ2 237 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 ENPP7Q6UWV6 458 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 OLIG3Q7RTU3 272 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 CENPVQ7Z7K6 275 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 ITIH5Q86UX2 942 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 SGPP2Q8IWX5 399 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 SIDT2Q8NBJ9 832 aaKnown RBP-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 RAD54LQ92698 747 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 WDR34Q96EX3 536 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF75AQ96N20 296 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 WFIKKN1Q96NZ8 548 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 NCAPGQ9BPX3 1015 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 PYM1Q9BRP8 204 aaKnown RBP-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 DNTTIP1Q9H147 329 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 SLC25A19Q9HC21 320 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 SAGE1Q9NXZ1 904 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 GIMAP2Q9UG22 337 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 TBX20Q9UMR3 447 aa-2.07□□□□□ -2.74
RNU6-539P-201ENST00000516665 USP6P35125 1406 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 ARHGAP32A7KAX9 2087 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 SBNO2Q9Y2G9 1366 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 OR2A25A4D2G3 310 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 C11orf98E9PRG8 122 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 INS-IGF2F8WCM5 200 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 TRIM77I1YAP6 450 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 XPO1O14980 1071 aaKnown RBP-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 FCGR3BO75015 233 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 TSPAN9O75954 239 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 OR2C1O95371 312 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 LALBAP00709 142 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 CHRNA1P02708 482 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 OR56A5P0C7T3 313 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 ALPPL2P10696 532 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 GHRP10912 638 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 CXCL12P48061 93 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 SPINK7P58062 85 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 UBXN2AP68543 259 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 P2RY14Q15391 338 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 LGALSLQ3ZCW2 172 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 IL23RQ5VWK5 629 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 LCN12Q6JVE5 192 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 CAPN13Q6MZZ7 669 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 MOXD1Q6UVY6 613 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 GPR141Q7Z602 305 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 POMGNT2Q8NAT1 580 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 RFFLQ8WZ73 363 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 ARHGEF2Q92974 986 aaKnown RBP-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 P2RX5Q93086 422 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 TRIM44Q96DX7 344 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 SPACA9Q96E40 222 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 LTV1Q96GA3 475 aaPredicted RBP-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 CAMK2N2Q96S95 79 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 FEVQ99581 238 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 SEC22CQ9BRL7 303 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 PAGR1Q9BTK6 254 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 VIPAS39Q9H9C1 493 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 EDA2RQ9HAV5 297 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 CCL28Q9NRJ3 127 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 PNPLA3Q9NST1 481 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 SLC17A7Q9P2U7 560 aa-2.08□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms