RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 C20orf173Q96LM9 149 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PPP1R36Q96LQ0 422 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 VSTM2LQ96N03 204 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 MS4A4EQ96PG1 132 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 OR52E6Q96RD3 313 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PANX1Q96RD7 426 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TRIB1Q96RU8 372 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 SECISBP2Q96T21 854 aaKnown RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 CGREF1Q99674 301 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 SH3GL1Q99961 368 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 HOPXQ9BPY8 73 aaPredicted RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 LMF2Q9BU23 707 aaKnown RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ALOXE3Q9BYJ1 711 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 WWTR1Q9GZV5 400 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 LHPPQ9H008 270 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PAIP1Q9H074 479 aaKnown RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ING2Q9H160 280 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 C1orf21Q9H246 121 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ADNPQ9H2P0 1102 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 RAD21L1Q9H4I0 556 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 EPS8L2Q9H6S3 715 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 CXorf36Q9H7Y0 433 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 C3orf14Q9HBI5 128 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 Q9N2J8 555 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 POLE3Q9NRF9 147 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ZCCHC3Q9NUD5 404 aaKnown RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TBC1D23Q9NUY8 699 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 DDX18Q9NVP1 670 aaKnown RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PARPBPQ9NWS1 579 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 GID8Q9NWU2 228 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 NDE1Q9NXR1 346 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 CCDC167Q9P0B6 97 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 SH3BP4Q9P0V3 963 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 C5AR2Q9P296 337 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ABCD2Q9UBJ2 740 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 BAIAP2L1Q9UHR4 511 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TAGLN3Q9UI15 199 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TEKT2Q9UIF3 430 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ZNF223Q9UK11 482 aaPredicted RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 FBXL4Q9UKA2 621 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 MRTO4Q9UKD2 239 aaKnown RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PRDM4Q9UKN5 801 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 VPS4AQ9UN37 437 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PCDHGB4Q9UN71 923 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 LIPT1Q9Y234 373 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 NDUFAF1Q9Y375 327 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PCDHGB3Q9Y5G1 929 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 HEMK1Q9Y5R4 338 aaPredicted RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 MRPS18BQ9Y676 258 aaKnown RBP2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 CLCA3PQ9Y6N3 262 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 FRYQ5TBA9 3013 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 DMXL2Q8TDJ6 3036 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ZFHX4Q86UP3 3567 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PTPRQQ9UMZ3 2332 aa2.02□□□□□ -2.09
SCARNA16.3-201ENST00000516595 IGF2RP11717 2491 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 CACNA1GO43497 2377 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TPRP12270 2363 aaKnown RBP2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 URB1O60287 2271 aaKnown RBP2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TRBV11-1A0A0K0K1C0 115 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 C2orf92A0A1B0GVN3 265 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 A0A1W2PQD3 144 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 OR2W5A6NFC9 320 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 OR6C70A6NIJ9 312 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 GLOD5A6NK44 160 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TMEM200CA6NKL6 621 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 EVPLLA8MZ36 301 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 FAM220BPB1ANY3 271 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 DIRC3C9JPN6 131 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 NPIPB9F8W1W9 429 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 MKRN2OSH3BPM6 223 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 NR5A2O00482 541 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 MRASO14807 208 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 NKX2-8O15522 239 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 RGS10O43665 173 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 RRP9O43818 475 aaKnown RBP2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 KIAA0513O60268 411 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TSPAN2O60636 221 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ATP5HO75947 161 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 NADKO95544 446 aaPredicted RBP2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 IFNA16P05015 189 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 HMGN2P05204 90 aaKnown RBP2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ALOX5P09917 674 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 CT45A8P0DMV1 189 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 CT45A9P0DMV2 189 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PRKAR1AP10644 381 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ITGAMP11215 1152 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 SFTPCP11686 197 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 COX4I1P13073 169 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 HSD17B1P14061 328 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 HOXB6P17509 224 aaKnown RBP2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 TNNI3P19429 210 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 RPS4Y1P22090 263 aaKnown RBP2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ITGA3P26006 1051 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 ABCD3P28288 659 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 OTX2P32243 289 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PCGF2P35227 344 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 SOAT1P35610 550 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 PIGAP37287 484 aa2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 FEN1P39748 380 aaKnown RBP2.01□□□□□ -2.09
SCARNA16.3-201ENST00000516595 CDKN2CP42773 168 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms