RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 RNF187Q5TA31 235 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 MEDAGQ5VYS4 303 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 DHRS7BQ6IAN0 325 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 TMEM211Q6ICI0 200 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZFP1Q6P2D0 407 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 DNM1P46Q6ZS02 220 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CHST3Q7LGC8 479 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 MAATS1Q7Z4T9 603 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CENPVQ7Z7K6 275 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 BIVMQ86UB2 503 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 NKAPP1Q8N9T2 125 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 OR5L2Q8NGL0 311 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CIRBP-AS1Q8TBR5 109 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 KRT35Q92764 455 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 TRIM44Q96DX7 344 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 VPS39Q96JC1 886 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CAPNS2Q96L46 248 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF75AQ96N20 296 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 SEPHS2Q99611 448 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CHAC1Q9BUX1 264 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 GPR63Q9BZJ6 419 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 FAM212BQ9NTI7 297 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 GPATCH2LQ9NWQ4 482 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 EMCNQ9ULC0 261 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 ANGPT4Q9Y264 503 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CELSR2Q9HCU4 2923 aa-1.72□□□□□ -2.69
RNU6-542P-201ENST00000516405 MYH11P35749 1972 aa-1.72□□□□□ -2.69
RNU6-542P-201ENST00000516405 UBR4Q5T4S7 5183 aa-1.72□□□□□ -2.69
RNU6-542P-201ENST00000516405 PLEKHH1Q9ULM0 1364 aa-1.72□□□□□ -2.69
RNU6-542P-201ENST00000516405 PHF3Q92576 2039 aaKnown RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 YJEFN3A6XGL0 299 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 ODF3BA8MYP8 253 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 E9PSI1 815 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 XPO1O14980 1071 aaKnown RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 KIAA0513O60268 411 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 MITFO75030 526 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 ANXA9O76027 345 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 CHRNA1P02708 482 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 STAG3L1P0CL83 205 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 IGHV1-8P0DP01 117 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 ALPPL2P10696 532 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 UBL4AP11441 157 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 ICAM2P13598 275 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 GABRB1P18505 474 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 SAA4P35542 130 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 PAFAH1B1P43034 410 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 OR3A3P47888 321 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 CXCL12P48061 93 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 SPINK7P58062 85 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 PLOD1Q02809 727 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 NFE2L1Q14494 772 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 PPA1Q15181 289 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 ZNF141Q15928 474 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 BAK1Q16611 211 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 LGALSLQ3ZCW2 172 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 CCDC38Q502W7 563 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 LCN12Q6JVE5 192 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 ENPP7Q6UWV6 458 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 VRK2Q86Y07 508 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 WDR49Q8IV35 697 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 CPOQ8IVL8 374 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 SGPP2Q8IWX5 399 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 ANKRD13CQ8N6S4 541 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 POMGNT2Q8NAT1 580 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 FAM184AQ8NB25 1140 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 SIDT2Q8NBJ9 832 aaKnown RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 FBXO25Q8TCJ0 367 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 CKAP2Q8WWK9 683 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 PRCCQ92733 491 aaPredicted RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 WDR34Q96EX3 536 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 MUS81Q96NY9 551 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 CAMK2N2Q96S95 79 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 GPR174Q9BXC1 333 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 CHIAQ9BZP6 476 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 FTOQ9C0B1 505 aaKnown RBP eCLIP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 DNTTIP1Q9H147 329 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 MTIF3Q9H2K0 278 aaKnown RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 EDA2RQ9HAV5 297 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 PNO1Q9NRX1 252 aaKnown RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 RBM28Q9NW13 759 aaKnown RBP-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 SAGE1Q9NXZ1 904 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 VPS18Q9P253 973 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 GIMAP2Q9UG22 337 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 KCNE2Q9Y6J6 123 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 DENND4AQ7Z401 1863 aa-1.73□□□□□ -2.69
RNU6-542P-201ENST00000516405 STARD9Q9P2P6 4700 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 DOCK3Q8IZD9 2030 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 HEATR5BQ9P2D3 2071 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 IGKV3-7A0A075B6H7 116 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 SMIM28A0A1B0GU29 152 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 OR2A25A4D2G3 310 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 BTNL10A8MVZ5 291 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 INS-IGF2F8WCM5 200 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 SLC19A2O60779 497 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 EIF2S1P05198 315 aaKnown RBP-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 OR56A5P0C7T3 313 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 ATF6P18850 670 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 SSTR1P30872 391 aa-1.74□□□□□ -2.69
RNU6-542P-201ENST00000516405 GCKP35557 465 aa-1.74□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms