RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TNFSF11O14788 317 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 CXCL13O43927 109 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF500O60304 480 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-215ENST00000515516 HRGP04196 525 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 PABPC4LP0CB38 370 aaKnown RBP12.27□□□□□ -0.45
TCOF1-215ENST00000515516 MATN1P21941 496 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 UGT2B10P36537 528 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ATP12AP54707 1039 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 SUMO3P55854 103 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-215ENST00000515516 CARD18P57730 90 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 C21orf58P58505 322 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 STX3Q13277 289 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 CD226Q15762 336 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 EXOC3L2Q2M3D2 409 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 KLHL26Q53HC5 615 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ANXA8L1Q5VT79 327 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF474Q6S9Z5 364 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-215ENST00000515516 LILRA2Q8N149 483 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF614Q8N883 585 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF610Q8N9Z0 462 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 OR4A15Q8NGL6 344 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 NUDT8Q8WV74 236 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ARL8AQ96BM9 186 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 MBD6Q96DN6 1003 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 GMPPAQ96IJ6 420 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-215ENST00000515516 WFIKKN1Q96NZ8 548 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ALPK1Q96QP1 1244 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 OR7D2Q96RA2 312 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 KLHL4Q9C0H6 718 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 TMEM185BQ9H7F4 350 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 KLHL28Q9NXS3 571 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 CARD8Q9Y2G2 431 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 ARHGAP21Q5T5U3 1957 aa12.27□□□□□ -0.45
TCOF1-215ENST00000515516 NPIPA5A0A0B4J1W7 369 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 NPIPA7E9PJI5 369 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 RNASET2O00584 256 aaKnown RBP12.26□□□□□ -0.45
TCOF1-215ENST00000515516 ADAMDEC1O15204 470 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 AQP8O94778 261 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 AK1P00568 194 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 CGAP01215 116 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 NPIPA8P0DM63 369 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 ADH6P28332 368 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 P2RX1P51575 399 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 HBA1P69905 142 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF117Q03924 483 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 DEFB113Q30KQ7 82 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 HHATQ5VTY9 493 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 OR4F3Q6IEY1 312 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 C6orf120Q7Z4R8 191 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 STK32CQ86UX6 486 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 TGIF2LYQ8IUE0 185 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 TMCO5AQ8N6Q1 288 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 TOR1AIP2Q8NFQ8 470 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 OR6K3Q8NGY3 331 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 OSTF1Q92882 214 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 KLHL15Q96M94 604 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF395Q9H8N7 513 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-215ENST00000515516 PLEKHF2Q9H8W4 249 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 EXD2Q9NVH0 621 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 CLEC4AQ9UMR7 237 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 DTNAQ9Y4J8 743 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 ACTL7BQ9Y614 415 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 GPC6Q9Y625 555 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-215ENST00000515516 KCNE3Q9Y6H6 103 aa12.26□□□□□ -0.45
TCOF1-215ENST00000515516 ANKRD17O75179 2603 aaKnown RBP12.25□□□□□ -0.45
TCOF1-215ENST00000515516 FREM3P0C091 2139 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 RNF103-CHMP3A0A140T963 221 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF195O14628 629 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 EIF4E2O60573 245 aaKnown RBP12.25□□□□□ -0.45
TCOF1-215ENST00000515516 SS18L1O75177 396 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-215ENST00000515516 ATE1O95260 518 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 AGR2O95994 175 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 LINGO3P0C6S8 592 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 LBPP18428 481 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 BGNP21810 368 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 PSMA4P25789 261 aaKnown RBP12.25□□□□□ -0.45
TCOF1-215ENST00000515516 ELK4P28324 431 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 SFTPDP35247 375 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 SLC6A8P48029 635 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 RNF144AP50876 292 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-215ENST00000515516 FOXF1Q12946 379 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 ATAD3BQ5T9A4 648 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 C16orf62Q7Z3J2 963 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 CLECL1Q8IZS7 167 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 OR8J2Q8NGG1 315 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 OR5D16Q8NGK9 328 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 RFWD2Q8NHY2 731 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 FBXO27Q8NI29 283 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 POC1BQ8TC44 478 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 ADGRG7Q96K78 797 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 SLC35G5Q96KT7 338 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 PLSCR4Q9NRQ2 329 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 C6orf203Q9P0P8 240 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-215ENST00000515516 RAB21Q9UL25 225 aa12.25□□□□□ -0.45
TCOF1-215ENST00000515516 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
TCOF1-215ENST00000515516 A0A0J9YW62 118 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 PRSS51A0A1B0GVH4 220 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF264O43296 627 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 STX11O75558 287 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms