RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GPR85P60893 370 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 SELENOWP63302 87 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 PLAURQ03405 335 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 SKP2Q13309 424 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 DUSP7Q16829 419 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 SLC6A19Q695T7 634 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 TIGD3Q6B0B8 471 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 CBLL1Q75N03 491 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 SMYD1Q8NB12 490 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 TOR1AIP2Q8NFQ8 470 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 POP5Q969H6 163 aaKnown RBP19.15■□□□□ 0.66
LSM6-207ENST00000515311 PNPLA2Q96AD5 504 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 RAB3IPQ96QF0 476 aaPredicted RBP19.15■□□□□ 0.66
LSM6-207ENST00000515311 TRIM15Q9C019 465 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 SLC25A18Q9H1K4 315 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 OLAHQ9NV23 265 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 KLHL28Q9NXS3 571 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 SAMD4AQ9UPU9 718 aaKnown RBP19.15■□□□□ 0.66
LSM6-207ENST00000515311 BOD1L1Q8NFC6 3051 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 TMEM229AB2RXF0 380 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 SUV39H1O43463 412 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 TPST1O60507 370 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 MEOX1P50221 254 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 RNF144AP50876 292 aaPredicted RBP19.14■□□□□ 0.65
LSM6-207ENST00000515311 SUMO3P55854 103 aaPredicted RBP19.14■□□□□ 0.65
LSM6-207ENST00000515311 ZNF117Q03924 483 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 FOXO1Q12778 655 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 FLOT2Q14254 428 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 INAQ16352 499 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 RPUSD3Q6P087 351 aaKnown RBP19.14■□□□□ 0.65
LSM6-207ENST00000515311 PCSK4Q6UW60 755 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 PLCZ1Q86YW0 608 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 ZNF440Q8IYI8 595 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 CLIP4Q8N3C7 705 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 FADS6Q8N9I5 356 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 WDSUB1Q8N9V3 476 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 ZFP62Q8NB50 900 aaPredicted RBP19.14■□□□□ 0.65
LSM6-207ENST00000515311 FAM98AQ8NCA5 519 aaKnown RBP19.14■□□□□ 0.65
LSM6-207ENST00000515311 GPR32P1Q8NGA4 272 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 OR1J4Q8NGS1 313 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 CNOT9Q92600 299 aaKnown RBP19.14■□□□□ 0.65
LSM6-207ENST00000515311 LAT2Q9GZY6 243 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 ZFP64Q9NPA5 681 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 RLIMQ9NVW2 624 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 DNAJB12Q9NXW2 375 aaKnown RBP19.14■□□□□ 0.65
LSM6-207ENST00000515311 TUBA8Q9NY65 449 aaPredicted RBP19.14■□□□□ 0.65
LSM6-207ENST00000515311 SLC13A4Q9UKG4 626 aa19.14■□□□□ 0.65
LSM6-207ENST00000515311 PINLYPA6NC86 204 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 C2orf72A6NCS6 295 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 LRRC3CA6NJW4 275 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 HCRTR2O43614 444 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 BCAS1O75363 584 aaPredicted RBP19.13■□□□□ 0.65
LSM6-207ENST00000515311 CIB2O75838 187 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 ZNF682O95780 498 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 EPPINO95925 133 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 LGI1O95970 557 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 FESP07332 822 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 UBTFL6P0CB48 400 aaPredicted RBP19.13■□□□□ 0.65
LSM6-207ENST00000515311 HYAL4Q2M3T9 481 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 GLIPR1L2Q4G1C9 344 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 CYP2R1Q6VVX0 501 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 SPPL2CQ8IUH8 684 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 B4GALNT2Q8NHY0 566 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 PROX1Q92786 737 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 LRGUKQ96M69 825 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 MFRPQ9BY79 579 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 PRDM4Q9UKN5 801 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 ICAM5Q9UMF0 924 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 CARD8Q9Y2G2 431 aa19.13■□□□□ 0.65
LSM6-207ENST00000515311 CFAP73A6NFT4 308 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 C17orf51A8MQB3 221 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 OIP5O43482 229 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 NQO1P15559 274 aaKnown RBP19.12■□□□□ 0.65
LSM6-207ENST00000515311 P2RX1P51575 399 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 NDUFAF6Q330K2 333 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 PLEKHN1Q494U1 663 aaPredicted RBP19.12■□□□□ 0.65
LSM6-207ENST00000515311 CBLN3Q6UW01 205 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.12■□□□□ 0.65
LSM6-207ENST00000515311 COMTD1Q86VU5 262 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 OR2M3Q8NG83 312 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 DTNBP1Q96EV8 351 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 SH3YL1Q96HL8 342 aaPredicted RBP19.12■□□□□ 0.65
LSM6-207ENST00000515311 TPD52L3Q96J77 140 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 ARHGDIGQ99819 225 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 LHX6Q9UPM6 363 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 C15orf41Q9Y2V0 281 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 HRH3Q9Y5N1 445 aa19.12■□□□□ 0.65
LSM6-207ENST00000515311 TCRBV5S2A0A599 114 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 AQP12BA6NM10 295 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 B4DXG7 233 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 GNB5O14775 395 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 CBR3O75828 277 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 GLSO94925 669 aaPredicted RBP19.11■□□□□ 0.65
LSM6-207ENST00000515311 SLC6A8P48029 635 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 INPP5JQ15735 1006 aaPredicted RBP19.11■□□□□ 0.65
LSM6-207ENST00000515311 NRF1Q16656 503 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 NADK2Q4G0N4 442 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 C1orf146Q5VVC0 180 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 OR5M10Q6IEU7 315 aa19.11■□□□□ 0.65
LSM6-207ENST00000515311 ZNF550Q7Z398 422 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms