RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 ANGPTL4Q9BY76 406 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 GABARAPL1Q9H0R8 117 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 CXorf36Q9H7Y0 433 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 PROK2Q9HC23 129 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 Q9N2J8 555 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 A4GALTQ9NPC4 353 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 SMPD3Q9NY59 655 aaPredicted RBP7.62□□□□□ -1.19
CCL28-204ENST00000514421 SEC14L3Q9UDX4 400 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 OR10H1Q9Y4A9 318 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 SNX8Q9Y5X2 465 aa7.62□□□□□ -1.19
CCL28-204ENST00000514421 CHCHD2Q9Y6H1 151 aaPredicted RBP7.62□□□□□ -1.19
CCL28-204ENST00000514421 SHANK1Q9Y566 2161 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 SPTAN1Q13813 2472 aaKnown RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 NINQ8N4C6 2090 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 PINLYPA6NC86 204 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 SAC3D1A6NKF1 404 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 TRIM64CA6NLI5 447 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 E9PQ18 207 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 G3V3Y1 287 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 EI24O14681 340 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 TFECO14948 347 aaPredicted RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 HS6ST1O60243 411 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 TPST1O60507 370 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 UGT2B11O75310 529 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 WISP2O76076 250 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 GLSO94925 669 aaPredicted RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 NKX2-2O95096 273 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 CST1P01037 141 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 ALOX5P09917 674 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 DCTP40126 519 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 RFC3P40938 356 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 PRIM2P49643 509 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 PSMD4P55036 377 aaKnown RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 SELENOWP63302 87 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 MYBPC1Q00872 1141 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 RBPJQ06330 500 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 FOXO1Q12778 655 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 MERTKQ12866 999 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 EPS8Q12929 822 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 MRPL49Q13405 166 aaKnown RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 SNTA1Q13424 505 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 APOFQ13790 326 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 DAG1Q14118 895 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 GK3PQ14409 553 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 SLC10A1Q14973 349 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 COX20Q5RI15 118 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCL28-204ENST00000514421 GCNT6Q5T4J0 391 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 SLC30A6Q6NXT4 461 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 TMEM81Q6P7N7 255 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 SHQ1Q6PI26 577 aaKnown RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 TBPL2Q6SJ96 375 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 GFRALQ6UXV0 394 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 SLC22A16Q86VW1 577 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 ZDHHC13Q8IUH4 622 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 OR4N2Q8NGD1 307 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 OR56A1Q8NGH5 318 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 OR5K1Q8NHB7 308 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 FBXO30Q8TB52 745 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 MIPOL1Q8TD10 442 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 SFXN5Q8TD22 340 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 GPR151Q8TDV0 419 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 SLC9A6Q92581 669 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 HOXB13Q92826 284 aaPredicted RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 NTNG2Q96CW9 530 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 GIMAP5Q96F15 307 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 C16orf58Q96GQ5 468 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 MS4A4EQ96PG1 132 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 NODALQ96S42 347 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 DOHHQ9BU89 302 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 ADI1Q9BV57 179 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 YTHDF1Q9BYJ9 559 aaKnown RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 TTTY12Q9BZ98 90 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 DEFB127Q9H1M4 99 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 ZFP64Q9NPA5 681 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 ZCCHC3Q9NUD5 404 aaKnown RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 THUMPD1Q9NXG2 353 aaKnown RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 GIN1Q9NXP7 522 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 TUBA8Q9NY65 449 aaPredicted RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 CBLCQ9ULV8 474 aa7.61□□□□□ -1.19
CCL28-204ENST00000514421 BOKQ9UMX3 212 aaPredicted RBP7.61□□□□□ -1.19
CCL28-204ENST00000514421 A0A0G2JMM0 328 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 RNF103-CHMP3A0A140T963 221 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 A0A1W2PPB8 328 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 A0A1W2PRS3 328 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 GXYLT2A0PJZ3 443 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 DPPA5A6NC42 116 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 DUXAA6NLW8 204 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 KIR3DP1A8MWS1 328 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 G3V2T6 193 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 PDLIM1O00151 329 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 ACOT7O00154 380 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 ICOSLGO75144 302 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 TRIM3O75382 744 aaPredicted RBP7.6□□□□□ -1.19
CCL28-204ENST00000514421 IL33O95760 270 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 HMGN2P05204 90 aaKnown RBP7.6□□□□□ -1.19
CCL28-204ENST00000514421 NUDT7P0C024 238 aa7.6□□□□□ -1.19
CCL28-204ENST00000514421 UBTFL6P0CB48 400 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms