RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 PDE9AO76083 593 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 VIMP08670 466 aaKnown RBP7.43□□□□□ -1.22
NEDD4-210ENST00000513957 BMP2P12643 396 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 PEPDP12955 493 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 CPN1P15169 458 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ELK4P28324 431 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ADH6P28332 368 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 EIF1P41567 113 aaKnown RBP7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF41P51814 821 aaPredicted RBP7.43□□□□□ -1.22
NEDD4-210ENST00000513957 EEFSECP57772 596 aaKnown RBP7.43□□□□□ -1.22
NEDD4-210ENST00000513957 GUCY1A3Q02108 690 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ART3Q13508 389 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 MAPRE2Q15555 327 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 TMEM95Q3KNT9 176 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 COQ5Q5HYK3 327 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 C6orf10Q5SRN2 563 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 C1orf185Q5T7R7 199 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 PRAMEF8Q5VWM4 474 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 PRAMEF7Q5VXH5 474 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 LRRC74BQ6ZQY2 392 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 RNF130Q86XS8 419 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 LACC1Q8IV20 430 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 FUNDC1Q8IVP5 155 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 CMIPQ8IY22 773 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF619Q8N2I2 560 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 METTL25Q8N6Q8 603 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 OR9I1Q8NGQ6 314 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 OR4C3Q8NH37 302 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ZPLD1Q8TCW7 415 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 NUDT8Q8WV74 236 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ASB5Q8WWX0 329 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 RND1Q92730 232 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 GTF2H4Q92759 462 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ABTB1Q969K4 478 aaPredicted RBP7.43□□□□□ -1.22
NEDD4-210ENST00000513957 SFXN2Q96NB2 322 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 TIMP4Q99727 224 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 SLC6A15Q9H2J7 730 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 SERHL2Q9H4I8 314 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF385DQ9H6B1 395 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 TPT1P8Q9HAU6 139 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 FGFR1OP2Q9NVK5 253 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 KLHL14Q9P2G3 628 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 SPRR3Q9UBC9 169 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 LEF1Q9UJU2 399 aaPredicted RBP7.43□□□□□ -1.22
NEDD4-210ENST00000513957 FBXL2Q9UKC9 423 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 SLC35A3Q9Y2D2 325 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 WDR45Q9Y484 360 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 SPTBN1Q01082 2364 aaKnown RBP7.43□□□□□ -1.22
NEDD4-210ENST00000513957 PTPN13Q12923 2485 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 PCNX1Q96RV3 2341 aa7.43□□□□□ -1.22
NEDD4-210ENST00000513957 ICE1Q9Y2F5 2266 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 BBIP1A8MTZ0 92 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 C9JVG2 144 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 NR5A2O00482 541 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ANGPT2O15123 496 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF264O43296 627 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ZIC3O60481 467 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ZG16O60844 167 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 EPPINO95925 133 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 NPPAP01160 153 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 OR12D1P0DN82 309 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 NAT2P11245 290 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 UBL4AP11441 157 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 HOXB9P17482 250 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 BMP7P18075 431 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 NCF2P19878 526 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 CHRNB4P30926 498 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 TIMP3P35625 211 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 CDKN2CP42773 168 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 P2RX1P51575 399 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ARFIP2P53365 341 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 CRISP3P54108 245 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 EEF1A1P68104 462 aaKnown RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 STX5Q13190 355 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 FGFBP1Q14512 234 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 AGKQ53H12 422 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 EIPR1Q53HC9 387 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 EMC4Q5J8M3 183 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 WIPI1Q5MNZ9 446 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 CCNJQ5T5M9 372 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 RIPPLY2Q5TAB7 128 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 EEF1A1P5Q5VTE0 462 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 RAET1LQ5VY80 246 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 TYW3Q6IPR3 259 aaKnown RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 TNFAIP8L2Q6P589 184 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 APOOLQ6UXV4 268 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 MAMDC2Q7Z304 686 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ZAR1Q86SH2 424 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 MARCH3Q86UD3 253 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ULK2Q8IYT8 1036 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 GTPBP8Q8N3Z3 284 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 DPP10Q8N608 796 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 FAM71CQ8NEG0 241 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 B4GALNT2Q8NHY0 566 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 RFWD2Q8NHY2 731 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 PHOSPHO1Q8TCT1 267 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 DUSP19Q8WTR2 217 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 XAGE5Q8WWM1 108 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ITLN2Q8WWU7 325 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 VPS33AQ96AX1 596 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms