RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 DYDC1Q8WWB3 177 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 FIG4Q92562 907 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 RAB8BQ92930 207 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 WNT2BQ93097 391 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 ZBTB8AQ96BR9 441 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 ZNF845Q96IR2 970 aaPredicted RBP5.87□□□□□ -1.47
KDM3B-208ENST00000512928 RNF145Q96MT1 663 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 PANX1Q96RD7 426 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 SIKE1Q9BRV8 207 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 SFXN3Q9BWM7 321 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 RBM24Q9BX46 236 aaKnown RBP5.87□□□□□ -1.47
KDM3B-208ENST00000512928 HOXD1Q9GZZ0 328 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 OR51I1Q9H343 314 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 ZNF385DQ9H6B1 395 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 HHATLQ9HCP6 504 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 MED17Q9NVC6 651 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 EXD2Q9NVH0 621 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 GPATCH2Q9NW75 528 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 CRIM1Q9NZV1 1036 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 CLCF1Q9UBD9 225 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 KCNN3Q9UGI6 736 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 CARD8Q9Y2G2 431 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 MRPS18CQ9Y3D5 142 aaKnown RBP5.87□□□□□ -1.47
KDM3B-208ENST00000512928 L3MBTL1Q9Y468 752 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 PHF3Q92576 2039 aaKnown RBP5.87□□□□□ -1.47
KDM3B-208ENST00000512928 PCNX1Q96RV3 2341 aa5.87□□□□□ -1.47
KDM3B-208ENST00000512928 OTOGQ6ZRI0 2925 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 DNAJC13O75165 2243 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 CACNA1CQ13936 2221 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 MED13LQ71F56 2210 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 KIAA1549Q9HCM3 1950 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 A0A087WZY1 265 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 IGLV3-32A0A0A0MS00 114 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 PRSS51A0A1B0GVH4 220 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 A0A1W2PNV4 684 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 DUXAA6NLW8 204 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 SYT5O00445 386 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 TNFSF11O14788 317 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 TNFRSF21O75509 655 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 STX11O75558 287 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 RCBTB2O95199 551 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 SYNGR4O95473 234 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 ANP32DO95626 131 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 GSNP06396 782 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 NGFRP08138 427 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 ALDOCP09972 364 aaKnown RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 OR12D1P0DN82 309 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 UBL4AP11441 157 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 FCGR2AP12318 317 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 ZNF17P17021 662 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 UQCRC2P22695 453 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 LCN1P31025 176 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 SFTPDP35247 375 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 PEX19P40855 299 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 KHKP50053 298 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 ATP12AP54707 1039 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 GUCY1A3Q02108 690 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 FOXF1Q12946 379 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 EXOC3L2Q2M3D2 409 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 DPY19L1Q2PZI1 675 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 PLPPR5Q32ZL2 321 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 GLYR1Q49A26 553 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 GPAT3Q53EU6 434 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 PDZK1Q5T2W1 519 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 POMZP3Q6PJE2 187 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 CBLN3Q6UW01 205 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 EPGNQ6UW88 154 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 DNAJC14Q6Y2X3 702 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 ZNF621Q6ZSS3 439 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 OLIG3Q7RTU3 272 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 SPATA19Q7Z5L4 167 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 HMGN2P46Q86SG4 172 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 LILRA2Q8N149 483 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 TRIML2Q8N7C3 387 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 TOR1AIP2Q8NFQ8 470 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 OR8J2Q8NGG1 315 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 OR10D3Q8NH80 312 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 PSMA8Q8TAA3 256 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 LINC01560Q8TB33 94 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 FNDC9Q8TBE3 224 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 FAM110BQ8TC76 370 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 PNPT1Q8TCS8 783 aaKnown RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 LRRC8CQ8TDW0 803 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 XAGE5Q8WWM1 108 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 HOXB13Q92826 284 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 TESCQ96BS2 214 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 ARSGQ96EG1 525 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 REXO5Q96IC2 774 aaKnown RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 TEX37Q96LM6 180 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 ZFP3Q96NJ6 502 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 OR52E6Q96RD3 313 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 TREX2Q9BQ50 279 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 GPATCH1Q9BRR8 931 aaKnown RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 SLC35A5Q9BS91 424 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 POLDIP3Q9BY77 421 aaKnown RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 CLEC4MQ9H2X3 399 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-208ENST00000512928 SERHL2Q9H4I8 314 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 SLC52A3Q9NQ40 469 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 AIG1Q9NVV5 245 aa5.86□□□□□ -1.47
KDM3B-208ENST00000512928 TMEM45AQ9NWC5 275 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms