RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SLC5A12Q1EHB4 618 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 CCDC152Q4G0S7 254 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 PAN3Q58A45 887 aaKnown RBP2.35□□□□□ -2.03
CHD1-207ENST00000511628 MEDAGQ5VYS4 303 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 WSCD1Q658N2 575 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 SCYL2Q6P3W7 929 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 SERPINA9Q86WD7 417 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 PRR22Q8IZ63 422 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 SLC38A6Q8IZM9 456 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 OR52M1Q8NGK5 317 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 TMEM80Q96HE8 168 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 VSIG2Q96IQ7 327 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 CYYR1Q96J86 154 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 B3GALT6Q96L58 329 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 C12orf66Q96MD2 445 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 SLC6A7Q99884 636 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 SLC30A2Q9BRI3 323 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 FEM1AQ9BSK4 669 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 CRACR2AQ9BSW2 395 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 TSSK1BQ9BXA7 367 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 GLIPR2Q9H4G4 154 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 GORASP2Q9H8Y8 452 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 POLD4Q9HCU8 107 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.35□□□□□ -2.03
CHD1-207ENST00000511628 PNO1Q9NRX1 252 aaKnown RBP2.35□□□□□ -2.03
CHD1-207ENST00000511628 PAK1IP1Q9NWT1 392 aaPredicted RBP2.35□□□□□ -2.03
CHD1-207ENST00000511628 SMPD3Q9NY59 655 aaPredicted RBP2.35□□□□□ -2.03
CHD1-207ENST00000511628 SIGLEC8Q9NYZ4 499 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 GNG12Q9UBI6 72 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 SNX6Q9UNH7 406 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 ZNF256Q9Y2P7 627 aaPredicted RBP2.35□□□□□ -2.03
CHD1-207ENST00000511628 OR10H1Q9Y4A9 318 aa2.35□□□□□ -2.03
CHD1-207ENST00000511628 GSAPA4D1B5 854 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 OR6C65A6NJZ3 312 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 H3BMQ9 156 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 K7ENP7 123 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 PRRG1O14668 218 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 TRIM3O75382 744 aaPredicted RBP2.34□□□□□ -2.03
CHD1-207ENST00000511628 LY6G6DO95868 133 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 CD55P08174 381 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 PDHBP11177 359 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 ATP5A1P25705 553 aaKnown RBP2.34□□□□□ -2.03
CHD1-207ENST00000511628 PSMA2P25787 234 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 MDH2P40926 338 aaKnown RBP2.34□□□□□ -2.03
CHD1-207ENST00000511628 XCR1P46094 333 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 GNPDA1P46926 289 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 RND3P61587 244 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 CBX1P83916 185 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 VLDLRP98155 873 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 BDH1Q02338 343 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 CUL1Q13616 776 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 SYPL1Q16563 259 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 QRICH1Q2TAL8 776 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 GLYR1Q49A26 553 aaPredicted RBP2.34□□□□□ -2.03
CHD1-207ENST00000511628 TEX44Q53QW1 395 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 C10orf120Q5SQS8 335 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 TTC23Q5W5X9 447 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 OR8G2PQ6IF36 304 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 VASH2Q86V25 355 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 OR51G2Q8NGK0 314 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 CCDC26Q8TAB7 109 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 TRUB1Q8WWH5 349 aaKnown RBP2.34□□□□□ -2.03
CHD1-207ENST00000511628 CTNNBL1Q8WYA6 563 aaPredicted RBP2.34□□□□□ -2.03
CHD1-207ENST00000511628 PSMG2Q969U7 264 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 MYLPFQ96A32 169 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 PELI1Q96FA3 418 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 SDSLQ96GA7 329 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 AMDHD1Q96NU7 426 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 RIT2Q99578 217 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 EDEM2Q9BV94 578 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 DUSP16Q9BY84 665 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 ELOVL4Q9GZR5 314 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 POLR1EQ9GZS1 481 aaKnown RBP2.34□□□□□ -2.03
CHD1-207ENST00000511628 CRLS1Q9UJA2 301 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 RIMS3Q9UJD0 308 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 MRPS33Q9Y291 106 aaKnown RBP2.34□□□□□ -2.03
CHD1-207ENST00000511628 SPACA6W5XKT8 324 aa2.34□□□□□ -2.03
CHD1-207ENST00000511628 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 ZNF705EA8MWA4 302 aaPredicted RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 E9PLD3 99 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 G3V4G9 280 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 BTN3A3O00478 584 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 GPAA1O43292 621 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 NUDT21O43809 227 aaKnown RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 GMFGO60234 142 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ZNF254O75437 659 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 GPX5O75715 221 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 KIAA0754O94854 1291 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 PGCP20142 388 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 GLRA2P23416 452 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 GDF1P27539 372 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 OTX2P32243 289 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 CHI3L1P36222 383 aaPredicted RBP2.33□□□□□ -2.04
CHD1-207ENST00000511628 PPT1P50897 306 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 SLC25A1P53007 311 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 CHIT1Q13231 466 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 ASAH1Q13510 395 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 SERTAD2Q14140 314 aa2.33□□□□□ -2.04
CHD1-207ENST00000511628 MXD4Q14582 209 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms