RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 DHRS13Q6UX07 377 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 M1APQ8TC57 530 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 GNPDA2Q8TDQ7 276 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 ELP5Q8TE02 316 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 DNAJA4Q8WW22 397 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-209ENST00000511426 CNOT9Q92600 299 aaKnown RBP13.99□□□□□ -0.17
SCLT1-209ENST00000511426 PMEPA1Q969W9 287 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 EFHD2Q96C19 240 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-209ENST00000511426 GPR87Q9BY21 358 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 MRPS26Q9BYN8 205 aaKnown RBP13.99□□□□□ -0.17
SCLT1-209ENST00000511426 ZNF223Q9UK11 482 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-209ENST00000511426 TMEM5Q9Y2B1 443 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 ASCC3Q8N3C0 2202 aaKnown RBP13.99□□□□□ -0.17
SCLT1-209ENST00000511426 CCDC88CQ9P219 2028 aa13.99□□□□□ -0.17
SCLT1-209ENST00000511426 GPR179Q6PRD1 2367 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 A0A0B4J2E0 115 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 A0A1B0GX12 115 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 EIF4E2O60573 245 aaKnown RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 PPM1BO75688 479 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 CCDC159P0C7I6 412 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ICAM2P13598 275 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 FPR3P25089 353 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 HTR2AP28223 471 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 GGT2P36268 569 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 CLK3P49761 638 aaKnown RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 COPZ1P61923 177 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 RPP38P78345 283 aaKnown RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 TSPAN31Q12999 210 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 PCOLCEQ15113 449 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ULK3Q6PHR2 472 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 KLHL17Q6TDP4 642 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 TMPRSS12Q86WS5 348 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 DND1Q8IYX4 353 aaKnown RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ZNF786Q8N393 782 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 SLC22A8Q8TCC7 542 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 TTC9Q92623 222 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ZNF566Q969W8 418 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ADOQ96SZ5 270 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 AKIRIN1Q9H9L7 192 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 C12orf10Q9HB07 376 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 MMP25Q9NPA2 562 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 SELENONQ9NZV5 590 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 NPFFR2Q9Y5X5 522 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 SEC16AO15027 2179 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 IGHV3-20A0A0C4DH32 117 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 TRBV11-1A0A0K0K1C0 115 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 C9orf172C9J069 976 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ZNF264O43296 627 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 SEC24DO94855 1032 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 CLIC3O95833 236 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 IGF2P01344 180 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 CYP4B1P13584 511 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 GSSP48637 474 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 CRISP1P54107 249 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 RPS15P62841 145 aaKnown RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 RAPSNQ13702 412 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 SSPNQ14714 243 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 FAM199XQ6PEV8 388 aaPredicted RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ZER1Q7Z7L7 766 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 SLC43A2Q8N370 569 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 CLDN22Q8N7P3 220 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 GTPBP3Q969Y2 492 aaKnown RBP13.98□□□□□ -0.17
SCLT1-209ENST00000511426 TMCO6Q96DC7 493 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 IMMP1LQ96LU5 166 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ZNF426Q9BUY5 554 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 LAT2Q9GZY6 243 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 TCFL5Q9UL49 500 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 SLC7A7Q9UM01 511 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 HS3ST3B1Q9Y662 390 aa13.98□□□□□ -0.17
SCLT1-209ENST00000511426 ZAR1LA6NP61 321 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 OR6B1O95007 311 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 GKN3PP0CG01 181 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 COX6A1P12074 109 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 PRG2P13727 222 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 POLR2IP36954 125 aaKnown RBP13.97□□□□□ -0.17
SCLT1-209ENST00000511426 GABARAPL2P60520 117 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 CDC42P60953 191 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 RPL13AP3Q6NVV1 102 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 RASSF6Q6ZTQ3 369 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 NUP54Q7Z3B4 507 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 TRUB1Q8WWH5 349 aaKnown RBP13.97□□□□□ -0.17
SCLT1-209ENST00000511426 PRSS27Q9BQR3 290 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 PRRG3Q9BZD7 231 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 TBL1XR1Q9BZK7 514 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 SLC19A3Q9BZV2 496 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 MYOTQ9UBF9 498 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 RPS6KB2Q9UBS0 482 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 REV1Q9UBZ9 1251 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 FARSAQ9Y285 508 aaKnown RBP13.97□□□□□ -0.17
SCLT1-209ENST00000511426 PCDHGA6Q9Y5G7 932 aa13.97□□□□□ -0.17
SCLT1-209ENST00000511426 A0A087WXM4 84 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 GTPBP1O00178 669 aaKnown RBP13.96□□□□□ -0.17
SCLT1-209ENST00000511426 MRPS14O60783 128 aaKnown RBP13.96□□□□□ -0.17
SCLT1-209ENST00000511426 ICOSLGO75144 302 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 THY1P04216 161 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 FTH1P19P0C7X4 201 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 PNMTP11086 282 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 CHMP24386 653 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 STAT5AP42229 794 aa13.96□□□□□ -0.17
SCLT1-209ENST00000511426 OMPP47874 163 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms