RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 UGT2B17O75795 530 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 H6PDO95479 791 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 NUDT14O95848 222 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 CHRM4P08173 479 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 VIMP08670 466 aaKnown RBP12.62□□□□□ -0.39
DDX41-212ENST00000511040 UBL4AP11441 157 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 ETFAP13804 333 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 CAPN3P20807 821 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 MSX1P28360 303 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 CRATP43155 626 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 CCR4P51679 360 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 SUCLG1P53597 346 aaKnown RBP12.62□□□□□ -0.39
DDX41-212ENST00000511040 HPCAP84074 193 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 CHRNEQ04844 493 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 SF3B4Q15427 424 aaKnown RBP eCLIP12.62□□□□□ -0.39
DDX41-212ENST00000511040 ZNF141Q15928 474 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 TMEM44Q2T9K0 475 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 PLPPR5Q32ZL2 321 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 RIPPLY2Q5TAB7 128 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 FRRS1Q6ZNA5 592 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 MTERF4Q7Z6M4 381 aaKnown RBP12.62□□□□□ -0.39
DDX41-212ENST00000511040 LACC1Q8IV20 430 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 ZPLD1Q8TCW7 415 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 GTF2H4Q92759 462 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 ZNF524Q96C55 264 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 ZG16BQ96DA0 208 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 SPDL1Q96EA4 605 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 RNF145Q96MT1 663 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 PIGQQ9BRB3 760 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 TMEM120AQ9BXJ8 343 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 PAIP1Q9H074 479 aaKnown RBP12.62□□□□□ -0.39
DDX41-212ENST00000511040 QRSL1Q9H0R6 528 aaKnown RBP12.62□□□□□ -0.39
DDX41-212ENST00000511040 TMEM185BQ9H7F4 350 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 TPT1P8Q9HAU6 139 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
DDX41-212ENST00000511040 A0A087WZY1 265 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 BCAS1O75363 584 aaPredicted RBP12.61□□□□□ -0.39
DDX41-212ENST00000511040 ZCCHC18P0CG32 403 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 NR2F1P10589 423 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 PEPDP12955 493 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 ANXA11P50995 505 aaKnown RBP12.61□□□□□ -0.39
DDX41-212ENST00000511040 ATP4BP51164 291 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 AGFG1P52594 562 aaKnown RBP12.61□□□□□ -0.39
DDX41-212ENST00000511040 MVDP53602 400 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 CLDN15P56746 228 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 CLDN20P56880 219 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 FOXF1Q12946 379 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 TOMM34Q15785 309 aaPredicted RBP12.61□□□□□ -0.39
DDX41-212ENST00000511040 GLYR1Q49A26 553 aaPredicted RBP12.61□□□□□ -0.39
DDX41-212ENST00000511040 PAGE3Q5JUK9 113 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 CGB2Q6NT52 195 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 ZNF619Q8N2I2 560 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 MEIOBQ8N635 442 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 POC1BQ8TC44 478 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 CALHM2Q9HA72 323 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 HHATLQ9HCP6 504 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 KCNJ16Q9NPI9 418 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 SLC52A3Q9NQ40 469 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 SLAMF8Q9P0V8 285 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 ICAM5Q9UMF0 924 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 L3MBTL1Q9Y468 752 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 PCDHB14Q9Y5E9 798 aa12.61□□□□□ -0.39
DDX41-212ENST00000511040 A0A096LPI6 279 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 CLDN24A6NM45 220 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 HSPB2A8KAH6 182 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 ZNF264O43296 627 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 TGM6O95932 706 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 CSTAP01040 98 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 IL2RAP01589 272 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 LINGO3P0C6S8 592 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 UBTFL6P0CB48 400 aaPredicted RBP12.6□□□□□ -0.39
DDX41-212ENST00000511040 TROVE2P10155 538 aaKnown RBP eCLIP12.6□□□□□ -0.39
DDX41-212ENST00000511040 ZNF17P17021 662 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 IL11P20809 199 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 BMP5P22003 454 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 CEACAM8P31997 349 aaPredicted RBP12.6□□□□□ -0.39
DDX41-212ENST00000511040 TIMP3P35625 211 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 P2RX1P51575 399 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 ZNF136P52737 540 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 DSTNP60981 165 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 HSPB2Q16082 182 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 CHMP1BQ7LBR1 199 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 GRAMD2AQ8IUY3 354 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 GTPBP8Q8N3Z3 284 aaPredicted RBP12.6□□□□□ -0.39
DDX41-212ENST00000511040 GPR119Q8TDV5 335 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 MARVELD3Q96A59 401 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 ZBTB8AQ96BR9 441 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 ZNF845Q96IR2 970 aaPredicted RBP12.6□□□□□ -0.39
DDX41-212ENST00000511040 TRNT1Q96Q11 434 aaKnown RBP12.6□□□□□ -0.39
DDX41-212ENST00000511040 SAP130Q9H0E3 1048 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 SLC38A1Q9H2H9 487 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 ZNF385DQ9H6B1 395 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 RUBCNLQ9H714 662 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 CHST11Q9NPF2 352 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 NPDC1Q9NQX5 325 aaPredicted RBP12.6□□□□□ -0.39
DDX41-212ENST00000511040 POLE3Q9NRF9 147 aa12.6□□□□□ -0.39
DDX41-212ENST00000511040 SLC25A37Q9NYZ2 338 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms