RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TAS2R43P59537 309 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 ELAVL3Q14576 367 aaKnown RBP13.92□□□□□ -0.18
USP38-202ENST00000510377 ENPP7Q6UWV6 458 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 COMMD2Q86X83 199 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 WFIKKN2Q8TEU8 576 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 ZG16BQ96DA0 208 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 ACTRT3Q9BYD9 372 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 SYNPO2LQ9H987 977 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 MED11Q9P086 117 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 ZNF236Q9UL36 1845 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 IGLV3-16A0A075B6K0 115 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 CASC3O15234 703 aaKnown RBP13.92□□□□□ -0.18
USP38-202ENST00000510377 CFL1P23528 166 aaKnown RBP13.92□□□□□ -0.18
USP38-202ENST00000510377 CST5P28325 142 aaPredicted RBP13.92□□□□□ -0.18
USP38-202ENST00000510377 BTN1A1Q13410 526 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 ZNF322Q6U7Q0 402 aaPredicted RBP13.92□□□□□ -0.18
USP38-202ENST00000510377 RNF165Q6ZSG1 346 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 TMPRSS12Q86WS5 348 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 LAS2Q8IYD9 372 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 RDH10Q8IZV5 341 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 LRRC25Q8N386 305 aaPredicted RBP13.92□□□□□ -0.18
USP38-202ENST00000510377 PLA2G15Q8NCC3 412 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 SLC16A11Q8NCK7 471 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 ZNF563Q8TA94 476 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 RBM18Q96H35 190 aaKnown RBP13.92□□□□□ -0.18
USP38-202ENST00000510377 BTBD2Q9BX70 525 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 C1QTNF7Q9BXJ2 289 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 ZDHHC5Q9C0B5 715 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 MKKSQ9NPJ1 570 aaPredicted RBP13.92□□□□□ -0.18
USP38-202ENST00000510377 WBP1LQ9NX94 342 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 A4GNTQ9UNA3 340 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 KCNE3Q9Y6H6 103 aa13.92□□□□□ -0.18
USP38-202ENST00000510377 MEIS3P1A6NDR6 274 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 PLATP00750 562 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 POLR2CP19387 275 aaPredicted RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 C12orf73Q69YU5 71 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 Q6ZNB5 142 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 TMC8Q8IU68 726 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 TMEM239Q8WW34 195 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 FCAMRQ8WWV6 532 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 GHSRQ92847 366 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 GCDHQ92947 438 aaPredicted RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 LRIG1Q96JA1 1093 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 SDHCQ99643 169 aaPredicted RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 NT5DC2Q9H857 520 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 ACSS1Q9NUB1 689 aaPredicted RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 NUBP2Q9Y5Y2 271 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 TRAPPC13A5PLN9 417 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 ELOA3DA6NLF2 546 aaPredicted RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 LCMT2O60294 686 aaKnown RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 ITGA10O75578 1167 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 SLC22A5O76082 557 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 SLC6A6P31641 620 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 HCCSP53701 268 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 TPBGQ13641 420 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 CDKN3Q16667 212 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 ELOA3BQ3SY89 546 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 CCDC157Q569K6 752 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 HBMQ6B0K9 141 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 ELOA3Q8NG57 546 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.91□□□□□ -0.18
USP38-202ENST00000510377 UBQLN3Q9H347 655 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 DPEP2Q9H4A9 486 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 A0A0G2JMZ2 1700 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 LRRC37A2A6NM11 1700 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 IRS1P35568 1242 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 PDX1P52945 283 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 PUS10Q3MIT2 529 aaKnown RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 METAP1DQ6UB28 335 aaPredicted RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 MEPCEQ7L2J0 689 aaKnown RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 TSEN54Q7Z6J9 526 aaKnown RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 BOLLQ8N9W6 283 aaKnown RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 GALNT6Q8NCL4 622 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 KIAA1143Q96AT1 154 aaPredicted RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 ARRDC3Q96B67 414 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 GPR174Q9BXC1 333 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 PELI2Q9HAT8 420 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 SRA1Q9HD15 236 aaKnown RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 REV1Q9UBZ9 1251 aa13.91□□□□□ -0.18
USP38-202ENST00000510377 EXO1Q9UQ84 846 aaKnown RBP13.91□□□□□ -0.18
USP38-202ENST00000510377 CIB4A0PJX0 185 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ACOD1A6NK06 481 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 EIF4EP06730 217 aaKnown RBP13.9□□□□□ -0.18
USP38-202ENST00000510377 CA3P07451 260 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 CTSLP07711 333 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 GABRB1P18505 474 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 GDI2P50395 445 aaKnown RBP13.9□□□□□ -0.18
USP38-202ENST00000510377 HMGA2P52926 109 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 DGCR2P98153 550 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 SCGB2B2Q4G0G5 96 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ZNF627Q7L945 461 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ZNF527Q8NB42 609 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 THEM6Q8WUY1 208 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 THAP4Q8WY91 577 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ORAI1Q96D31 301 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 WFDC6Q9BQY6 131 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 IL23AQ9NPF7 189 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ASB4Q9Y574 426 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 PDCD5O14737 125 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 RAD1O60671 282 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms