RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 CORO6Q6QEF8 472 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 TMEM135Q86UB9 458 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 TTC29Q8NA56 475 aaPredicted RBP4.53□□□□□ -1.68
NEK1-204ENST00000509912 C17orf47Q8NEP4 570 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 LINC00476Q8WZB0 136 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 RAPGEF5Q92565 580 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 MAP6D1Q9H9H5 199 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 EQTNQ9NQ60 294 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 NDUFA13Q9P0J0 144 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 GNPTGQ9UJJ9 305 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 LAMA5O15230 3695 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 LOC105371267A0A1B0GV96 52 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 PRSS51A0A1B0GVH4 220 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 hDV102S1A0JD36 115 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 LRRD1A4D1F6 860 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 ANKUB1A6NFN9 424 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 CTDSPLO15194 276 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 HDAC3O15379 428 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 PFDN1O60925 122 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 CRYABP02511 175 aaKnown RBP4.53□□□□□ -1.68
NEK1-204ENST00000509912 ALPPP05187 535 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 SMIM18P0DKX4 95 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 EPORP19235 508 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 HOXA5P20719 270 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 PCGF2P35227 344 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 DLSTP36957 453 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 CTSCP53634 463 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 PLTPP55058 493 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 DCDP81605 110 aaKnown RBP4.53□□□□□ -1.68
NEK1-204ENST00000509912 OTUD4Q01804 1114 aaKnown RBP4.53□□□□□ -1.68
NEK1-204ENST00000509912 NPRL3Q12980 569 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 PLA2G7Q13093 441 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 GRB7Q14451 532 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 NCF4Q15080 339 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 SF3B4Q15427 424 aaKnown RBP eCLIP4.53□□□□□ -1.685e-12■■■■□ 20.6
NEK1-204ENST00000509912 FBXL19-AS1Q494R0 122 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 HSP90AA5PQ58FG0 334 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 C6orf183Q5T699 404 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 DUPD1Q68J44 220 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 ASB18Q6ZVZ8 466 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 CCDC50Q8IVM0 306 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 MMGT1Q8N4V1 131 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 SCCPDHQ8NBX0 429 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 BBOF1Q8ND07 529 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 CCDC110Q8TBZ0 833 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 CT55Q8WUE5 264 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 UBTD2Q8WUN7 234 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 ASZ1Q8WWH4 475 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 EXT2Q93063 718 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 FAM46BQ96A09 425 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 ZNF559Q9BR84 538 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 PELOQ9BRX2 385 aaKnown RBP4.53□□□□□ -1.68
NEK1-204ENST00000509912 ERP44Q9BS26 406 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 SLC25A23Q9BV35 468 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 MMP27Q9H306 513 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 MMP25Q9NPA2 562 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 LAMP5Q9UJQ1 280 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 SH3GLB1Q9Y371 365 aa4.53□□□□□ -1.68
NEK1-204ENST00000509912 C1orf232A0A0U1RR37 186 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 E7EQ34 232 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 TO15178 435 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 SLC25A14O95258 325 aaPredicted RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 SERPINA7P05543 415 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 JAK1P23458 1154 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 WNT5AP41221 380 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 ALDH3A2P51648 485 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 IGLV3-21P80748 117 aaPredicted RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 KLC1Q07866 573 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 SIX1Q15475 284 aaPredicted RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 ODF2Q5BJF6 829 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 RNASEH2BQ5TBB1 312 aaKnown RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 ATP1A1-AS1Q5TC04 95 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 C10orf53Q8N6V4 93 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 CDC26Q8NHZ8 85 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 OCC1Q8TAD7 63 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 RNF138Q8WVD3 245 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 DYDC1Q8WWB3 177 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 ATL1Q8WXF7 558 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 RAD51AP1Q96B01 352 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 CXorf40BQ96DE9 158 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 CDKN2AIPNLQ96HQ2 116 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 KRT12Q99456 494 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 ULBP3Q9BZM4 244 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 UGT1A7Q9HAW7 530 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 APMAPQ9HDC9 416 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 ATPIF1Q9UII2 106 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 MRPS18BQ9Y676 258 aaKnown RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 TLN1Q9Y490 2541 aaKnown RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 SOCS6O14544 535 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 STX7O15400 261 aaKnown RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 VPS26AO75436 327 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 KLF7O75840 302 aaPredicted RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 WISP2O76076 250 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 GSTT2P0CG29 244 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 GSTT2BP0CG30 244 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 ACP2P11117 423 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 VPREB1P12018 145 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 NR1D1P20393 614 aa4.52□□□□□ -1.69
NEK1-204ENST00000509912 KPNA2P52292 529 aaKnown RBP4.52□□□□□ -1.69
NEK1-204ENST00000509912 PROK1P58294 105 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms