RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ESYT3A0FGR9 886 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 SLC35F4A4IF30 521 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 PPP6CO00743 305 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 NDUFB5O43674 189 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 SMIM24O75264 130 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 PRKD3O94806 890 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 KCNH1O95259 989 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 PGM3O95394 542 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 NTN1O95631 604 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 OXSR1O95747 527 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 IGKV1D-16P01601 117 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 KRT6AP02538 564 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 KRT6BP04259 564 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 JUNP05412 331 aaKnown RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 YES1P07947 543 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 HNF1AP20823 631 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 PTNP21246 168 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 ELK4P28324 431 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 TYK2P29597 1187 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 KRT6CP48668 564 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 SERPINB8P50452 374 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF41P51814 821 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 MANFP55145 182 aaKnown RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 DEFA6Q01524 100 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 SLC18A2Q05940 514 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 SPIN4Q56A73 249 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 FAM120AOSQ5T036 256 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 TMEM107Q6UX40 140 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 RPS27LQ71UM5 84 aaKnown RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 GSPT2Q8IYD1 628 aaKnown RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 LILRA2Q8N149 483 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 FBXL14Q8N1E6 418 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 SLC43A2Q8N370 569 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 MUC15Q8N387 334 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 POC1BQ8TC44 478 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF483Q8TF39 744 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 HOXB13Q92826 284 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 ELP4Q96EB1 424 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 ERP44Q9BS26 406 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 C1QTNF3Q9BXJ4 246 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 SRXN1Q9BYN0 137 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 TMEM185BQ9H7F4 350 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 BCO1Q9HAY6 547 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 DDX18Q9NVP1 670 aaKnown RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 SIRT5Q9NXA8 310 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 TAS2R7Q9NYW3 318 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 NPAP1Q9NZP6 1156 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 GRID1Q9ULK0 1009 aa8.3□□□□□ -1.08
NEDD9-211ENST00000508546 UTP11Q9Y3A2 253 aaKnown RBP8.3□□□□□ -1.08
NEDD9-211ENST00000508546 GXYLT2A0PJZ3 443 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 E7EQL1 145 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 MANBAO00462 879 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 LYZL6O75951 148 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 OR4F21O95013 312 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 LINGO3P0C6S8 592 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 CHN1P15882 459 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 COX5AP20674 150 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 DDCP20711 480 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 SHC1P29353 583 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 TIA1P31483 386 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEDD9-211ENST00000508546 GABRA3P34903 492 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 SFTPDP35247 375 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 MAP3K8P41279 467 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 EIF1P41567 113 aaKnown RBP8.29□□□□□ -1.08
NEDD9-211ENST00000508546 MAGEA4P43358 317 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 OR3A2P47893 321 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 RFX3P48380 749 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 NCBP2P52298 156 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEDD9-211ENST00000508546 EFNA4P52798 201 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 CDH13P55290 713 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 ACSM2AQ08AH3 577 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 SLC29A2Q14542 456 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 STK11Q15831 433 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 PRSS53Q2L4Q9 553 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 TCHHL1Q5QJ38 904 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-211ENST00000508546 ACSM2BQ68CK6 577 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 TMEM108Q6UXF1 575 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 IL17RELQ6ZVW7 336 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 FCRLAQ7L513 359 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 MISPQ8IVT2 679 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 RFLNBQ8N5W9 214 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.29□□□□□ -1.08
NEDD9-211ENST00000508546 CDYL2Q8N8U2 506 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 OR4C3Q8NH37 302 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 ACPTQ9BZG2 426 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 VPS11Q9H270 941 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 DPH5Q9H2P9 285 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 GLIPR2Q9H4G4 154 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 CHODLQ9H9P2 273 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 GRHL1Q9NZI5 618 aa8.29□□□□□ -1.08
NEDD9-211ENST00000508546 LOC100289279A0A1B0GTE1 492 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 A0A1W2PQD3 144 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 OR5H1A6NKK0 313 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 GJE1A6NN92 205 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 VWC2LB2RUY7 222 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 NDUFS8O00217 210 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 RGS14O43566 566 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 ULK1O75385 1050 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 NKX2-2O95096 273 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 DHRS4L1P0CG22 281 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms