RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 EPHA6Q9UF33 1036 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 DIMT1Q9UNQ2 313 aaKnown RBP6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 GSTK1Q9Y2Q3 226 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 ACOT9Q9Y305 439 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 MSH6P52701 1360 aa6.89□□□□□ -1.31
PDGFRA-206ENST00000508170 KBTBD11-OT1A0A1B0GTJ5 212 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 C5orf60A6NFR6 353 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 SAGE2PA6NJ88 616 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 NUPL2O15504 423 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 HPXP02790 462 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CXCR2P25025 360 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 NPY2RP49146 381 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CORO7P57737 925 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CCL7P80098 99 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 SRSF1Q07955 248 aaKnown RBP eCLIP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MED21Q13503 144 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 PTGISQ16647 500 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 TCTN1Q2MV58 587 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 TRIM16LQ309B1 348 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 BICRALQ6AI39 1079 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 ADAM5Q6NVV9 412 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 SPESP1Q6UW49 350 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CERS6Q6ZMG9 384 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 FCRLAQ7L513 359 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 SATL1Q86VE3 508 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 WFDC8Q8IUA0 241 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 PGAM4Q8N0Y7 254 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MFSD4AQ8N468 514 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 TMEM35BQ8NCS4 154 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 OR13C5Q8NGS8 318 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MRAPQ8TCY5 172 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 ERGIC1Q969X5 290 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 RAB39BQ96DA2 213 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 ZNF385AQ96PM9 386 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 IL4I1Q96RQ9 567 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MEIS3Q99687 375 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 NIPSNAP1Q9BPW8 284 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 COL25A1Q9BXS0 654 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 SLC2A11Q9BYW1 496 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 KATNBL1Q9H079 304 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 PORCNQ9H237 461 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 SLA2Q9H6Q3 261 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CDH20Q9HBT6 801 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 LRRC4CQ9HCJ2 640 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MLXIPLQ9NP71 852 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 PHPT1Q9NRX4 125 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MIOSQ9NXC5 875 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 ARL15Q9NXU5 204 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CLN8Q9UBY8 286 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MAP3K5Q99683 1374 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 KCNE1BA0A087WTH5 132 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MEGF11A6BM72 1044 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 HSPB2A8KAH6 182 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 ADARB2-AS1A8MUL3 147 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 PDHXO00330 501 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 TM9SF1O15321 606 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CRHP06850 196 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 WARSP23381 471 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 DCKP27707 260 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 RAG2P55895 527 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 KCNK10P57789 538 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 NME3Q13232 169 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 HSPB2Q16082 182 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CYP1B1Q16678 543 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 APOBEC3HQ6NTF7 200 aaKnown RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 TAPT1Q6NXT6 567 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 TMEM132CQ8N3T6 1108 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MFSD9Q8NBP5 474 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 OR52L2PQ8NGH6 319 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 OR52E5Q8NH55 327 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 MCCC1Q96RQ3 725 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 TIMM29Q9BSF4 260 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 C16orf70Q9BSU1 422 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 DUSP23Q9BVJ7 150 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 SPRTNQ9H040 489 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 FBXO8Q9NRD0 319 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CCNL1Q9UK58 526 aaPredicted RBP6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 CDC42EP3Q9UKI2 254 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 PTPRUQ92729 1446 aa6.88□□□□□ -1.31
PDGFRA-206ENST00000508170 SLC31A2O15432 143 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 SRP72O76094 671 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 AP2A2O94973 939 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 PLEKHA8P1O95397 391 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 LDOC1O95751 146 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 EGFP01133 1207 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 AMHP03971 560 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 CD36P16671 472 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 CCKBRP32239 447 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 MAGEA3P43357 314 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 GLUD2P49448 558 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 PRELPP51888 382 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 AP1S1P61966 158 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 CKAP4Q07065 602 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 LTB4RQ15722 352 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 GLYR1Q49A26 553 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 TIGD5Q53EQ6 642 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 PAN3Q58A45 887 aaKnown RBP6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 CCNI2Q6ZMN8 369 aaPredicted RBP6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 CROCCP3Q8IVE0 287 aa6.87□□□□□ -1.31
PDGFRA-206ENST00000508170 RIBC1Q8N443 379 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms