RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZFP41Q8N8Y5 198 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 UXS1Q8NBZ7 420 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAM71CQ8NEG0 241 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR4F15Q8NGB8 312 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR11H7Q8NGC8 314 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR4D11Q8NGI4 311 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR8D4Q8NGM9 314 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2L2Q8NH16 312 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR5W2Q8NH69 310 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 LHFPL5Q8TAF8 219 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 HAVCR2Q8TDQ0 301 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SMIM4Q8WVI0 70 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 DIO2Q92813 273 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PMM1Q92871 262 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RBPMSQ93062 196 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OTUB2Q96DC9 234 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 NUS1Q96E22 293 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC41A3Q96GZ6 507 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 MSANTD3Q96H12 275 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SENP5Q96HI0 755 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAM46AQ96IP4 442 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 COQ10AQ96MF6 247 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 AMDHD1Q96NU7 426 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 F2RL3Q96RI0 385 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC22A12Q96S37 553 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 DPYSL5Q9BPU6 564 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 DPCDQ9BVM2 203 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 C1QTNF7Q9BXJ2 289 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMPRSS13Q9BYE2 586 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PLA2G12AQ9BZM1 189 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF436Q9C0F3 470 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SMG9Q9H0W8 520 aaKnown RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2AG1Q9H205 316 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 GLIPR2Q9H4G4 154 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ERVMER34-1Q9H9K5 563 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF334Q9HCZ1 680 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLAMF7Q9NQ25 335 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 C12orf4Q9NQ89 552 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 DLL4Q9NR61 685 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 C14orf105Q9NVL8 296 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 SAGE1Q9NXZ1 904 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RDH8Q9NYR8 311 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 FRRS1LQ9P0K9 344 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PFDN2Q9UHV9 154 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 MOSPD1Q9UJG1 213 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 CLEC4EQ9ULY5 219 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 RASD1Q9Y272 281 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 ASF1AQ9Y294 204 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 NPTNQ9Y639 398 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 KCNMB2Q9Y691 235 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 CSNK1G3Q9Y6M4 447 aa4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 NUP214P35658 2090 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P16-201ENST00000508037 PLXNA2O75051 1894 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 DOCK3Q8IZD9 2030 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 COL4A6Q14031 1691 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TRAV6A0A075B6T7 132 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TBC1D3KA0A087X1G2 549 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A0A6YYD5 115 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ARPC4-TTLL3A0A0A6YYG9 625 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A1B0GUH1 482 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A1W2PPL8 197 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A1W2PQ45 241 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A1W2PQY0 241 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 hCG_1807616A0A1W2PRN6 198 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TRAPPC13A5PLN9 417 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TBC1D3BA6NDS4 549 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 TBC1D3FA6NER0 549 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC9B1P1A6NJY1 282 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CPSF4LA6NMK7 179 aaKnown RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPR89AB7ZAQ6 455 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 NEDD8-MDP1E9PL57 170 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAM229AH3BQW9 127 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SMLR1H3BR10 107 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 J3QRE1 110 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 MAN2B1O00754 1011 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 KLF4O43474 513 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR1F1O43749 312 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPRIN2O60269 458 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 FMO6PO60774 539 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 NCR1O76036 304 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 APOL3O95236 402 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 LDOC1O95751 146 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 IFNGP01579 166 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 ASGR2P07307 311 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CHRM4P08173 479 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CLTBP09497 229 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPR89BP0CG08 455 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRG2P13727 222 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CPN1P15169 458 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 LAG3P18627 525 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 POU3F3P20264 500 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 GIFP27352 417 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 BTCP35070 178 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 THBS2P35442 1172 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAUP35544 74 aaKnown RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 SOX18P35713 384 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 PPM1AP35813 382 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 NUP62P37198 522 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 OPRD1P41143 372 aa4.62□□□□□ -1.67
HMGB3P16-201ENST00000508037 CCR9P51686 369 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms