RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TRAPPC6AO75865 159 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 GLSO94925 669 aaPredicted RBP18.3■□□□□ 0.52
USP53-203ENST00000507597 MFN2O95140 757 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 C8BP07358 591 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 SRD5A2P31213 254 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 GLYR1Q49A26 553 aaPredicted RBP18.3■□□□□ 0.52
USP53-203ENST00000507597 GLYATQ6IB77 296 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 VRK2Q86Y07 508 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 CISD2Q8N5K1 135 aaKnown RBP18.3■□□□□ 0.52
USP53-203ENST00000507597 FADS6Q8N9I5 356 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 WDSUB1Q8N9V3 476 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 Q8NA96 180 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 OR5W2Q8NH69 310 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 TMEM234Q8WY98 164 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 PROX1Q92786 737 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 SLC7A6OSQ96CW6 309 aaPredicted RBP18.3■□□□□ 0.52
USP53-203ENST00000507597 QRSL1Q9H0R6 528 aaKnown RBP18.3■□□□□ 0.52
USP53-203ENST00000507597 LDAHQ9H6V9 325 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 OLAHQ9NV23 265 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 MED11Q9P086 117 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 LUZP4Q9P127 313 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 KCNE5Q9UJ90 142 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 CARD8Q9Y2G2 431 aa18.3■□□□□ 0.52
USP53-203ENST00000507597 ANKUB1A6NFN9 424 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 SYT5O00445 386 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 UBTFL6P0CB48 400 aaPredicted RBP18.29■□□□□ 0.52
USP53-203ENST00000507597 GGT1P19440 569 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 TCN1P20061 433 aaPredicted RBP18.29■□□□□ 0.52
USP53-203ENST00000507597 PGM1P36871 562 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 CCR4P51679 360 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 COPZ1P61923 177 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 INPP5JQ15735 1006 aaPredicted RBP18.29■□□□□ 0.52
USP53-203ENST00000507597 CD226Q15762 336 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 LRRC23Q53EV4 343 aaPredicted RBP18.29■□□□□ 0.52
USP53-203ENST00000507597 MRPL2Q5T653 305 aaKnown RBP18.29■□□□□ 0.52
USP53-203ENST00000507597 FNDC7Q5VTL7 733 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 OR5M10Q6IEU7 315 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 EID3Q8N140 333 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 TMEM251Q8N6I4 163 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 RNF148Q8N7C7 305 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 OR2M3Q8NG83 312 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 FAR1Q8WVX9 515 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 SH3YL1Q96HL8 342 aaPredicted RBP18.29■□□□□ 0.52
USP53-203ENST00000507597 GORASP2Q9H8Y8 452 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 ACKR4Q9NPB9 350 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 SAMD4AQ9UPU9 718 aaKnown RBP18.29■□□□□ 0.52
USP53-203ENST00000507597 SLC9A8Q9Y2E8 581 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 SNX13Q9Y5W8 968 aa18.29■□□□□ 0.52
USP53-203ENST00000507597 A0A0G2JMM0 328 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 A0A1W2PPB8 328 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 A0A1W2PRS3 328 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 CDHR4A6H8M9 788 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 PINLYPA6NC86 204 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 LRRC3CA6NJW4 275 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 FAM166BA8MTA8 275 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 KIR3DP1A8MWS1 328 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 LINC01387J3KSC0 135 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 SUV39H1O43463 412 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 LINGO3P0C6S8 592 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 DPP4P27487 766 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 EIF1P41567 113 aaKnown RBP18.28■□□□□ 0.52
USP53-203ENST00000507597 NCALDP61601 193 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 EEF1A1P68104 462 aaKnown RBP18.28■□□□□ 0.52
USP53-203ENST00000507597 MTX3Q5HYI7 312 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 ZNF836Q6ZNA1 936 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 ZNF563Q8TA94 476 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 NR4A3Q92570 626 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 ZBTB8AQ96BR9 441 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 SNRNP40Q96DI7 357 aaKnown RBP18.28■□□□□ 0.52
USP53-203ENST00000507597 ARSGQ96EG1 525 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 C1GALT1C1Q96EU7 318 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 TRIM15Q9C019 465 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 EXO5Q9H790 373 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 ZNF703Q9H7S9 590 aaPredicted RBP18.28■□□□□ 0.52
USP53-203ENST00000507597 EXPH5Q8NEV8 1989 aa18.28■□□□□ 0.52
USP53-203ENST00000507597 CFAP73A6NFT4 308 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 GSC2O15499 205 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 HCN1O60741 890 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 HPNP05981 417 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 IFNA8P32881 189 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 MAGEA5P43359 124 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 KCNJ5P48544 419 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 PMP22Q01453 160 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 ZNF117Q03924 483 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 RBPJQ06330 500 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 TRIM25Q14258 630 aaKnown RBP18.27■□□□□ 0.52
USP53-203ENST00000507597 AAGABQ6PD74 315 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 YTHDF3Q7Z739 585 aaKnown RBP18.27■□□□□ 0.52
USP53-203ENST00000507597 FAM71CQ8NEG0 241 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 OR14L1PQ8NHC6 308 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 CPT1CQ8TCG5 803 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 LRGUKQ96M69 825 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 NSMCE2Q96MF7 247 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 TAAR6Q96RI8 345 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 PIGQQ9BRB3 760 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 LRMDAQ9H2I8 198 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 UBQLN3Q9H347 655 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 ZDHHC11Q9H8X9 412 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 TAS2R10Q9NYW0 307 aa18.27■□□□□ 0.52
USP53-203ENST00000507597 EGFL7Q9UHF1 273 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms