RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CAPN3P20807 821 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 KIR2DL3P43628 341 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 CPA2P48052 419 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 KHKP50053 298 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 P2RX1P51575 399 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 SUCLG1P53597 346 aaKnown RBP14.04□□□□□ -0.16
CLDND1-211ENST00000506575 CASP9P55211 416 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 TPD52P55327 224 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-211ENST00000506575 CLDN15P56746 228 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 GPR68Q15743 365 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 SGCBQ16585 318 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 TMEM44Q2T9K0 475 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 PLPPR5Q32ZL2 321 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 ARHGAP11BQ3KRB8 267 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 SAXO2Q658L1 398 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 PPP4R4Q6NUP7 873 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 KIF18BQ86Y91 864 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 GTPBP8Q8N3Z3 284 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-211ENST00000506575 CHDHQ8NE62 594 aaPredicted RBP14.04□□□□□ -0.16
CLDND1-211ENST00000506575 MIPOL1Q8TD10 442 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 DYDC1Q8WWB3 177 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 XAGE5Q8WWM1 108 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 NEURL3Q96EH8 262 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 MAELQ96JY0 434 aaKnown RBP14.04□□□□□ -0.16
CLDND1-211ENST00000506575 MARK4Q96L34 752 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 RNF145Q96MT1 663 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 PANX1Q96RD7 426 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 SLC35A5Q9BS91 424 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 NMUR2Q9GZQ4 415 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 PIGMQ9H3S5 423 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 CARD8Q9Y2G2 431 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 PDZD2O15018 2839 aa14.04□□□□□ -0.16
CLDND1-211ENST00000506575 C7orf72A4D263 438 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 ENO4A6NNW6 628 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 UBDO15205 165 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 DIAPH2O60879 1101 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 SLC22A3O75751 556 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 CRHP06850 196 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 IL12AP29459 219 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 EIF1P41567 113 aaKnown RBP14.03□□□□□ -0.16
CLDND1-211ENST00000506575 ANXA11P50995 505 aaKnown RBP14.03□□□□□ -0.16
CLDND1-211ENST00000506575 SUMO3P55854 103 aaPredicted RBP14.03□□□□□ -0.16
CLDND1-211ENST00000506575 HPCAP84074 193 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 SNTB1Q13884 538 aaKnown RBP14.03□□□□□ -0.16
CLDND1-211ENST00000506575 PON3Q15166 354 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 GSTA3Q16772 222 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 PDCD4Q53EL6 469 aaKnown RBP14.03□□□□□ -0.16
CLDND1-211ENST00000506575 TTMPQ5BVD1 217 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
CLDND1-211ENST00000506575 PDZK1Q5T2W1 519 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 TNFAIP8L2Q6P589 184 aaPredicted RBP14.03□□□□□ -0.16
CLDND1-211ENST00000506575 LUZP2Q86TE4 346 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 TMEM200AQ86VY9 491 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 TMCO5AQ8N6Q1 288 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 CNEP1R1Q8N9A8 125 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 RFWD2Q8NHY2 731 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 FIG4Q92562 907 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 C7orf26Q96N11 449 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 PRRG4Q9BZD6 226 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 PACSIN3Q9UKS6 424 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 MKLN1Q9UL63 735 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 ZNF175Q9Y473 711 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 USH1CQ9Y6N9 552 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 CCDC168Q8NDH2 2452 aa14.03□□□□□ -0.16
CLDND1-211ENST00000506575 A0A1W2PNV4 684 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 CCDC154A6NI56 674 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 HMGB1P1B2RPK0 211 aaPredicted RBP14.02□□□□□ -0.17
CLDND1-211ENST00000506575 NPIPB9F8W1W9 429 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 ZNF264O43296 627 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 EIF4E2O60573 245 aaKnown RBP14.02□□□□□ -0.17
CLDND1-211ENST00000506575 IL6P05231 212 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 UBL4AP11441 157 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 FCGR2AP12318 317 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 EIF1AXP47813 144 aaKnown RBP14.02□□□□□ -0.17
CLDND1-211ENST00000506575 CCR4P51679 360 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 RAC1P63000 192 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 PDSS1Q5T2R2 415 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 HEPHL1Q6MZM0 1159 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 CBLN3Q6UW01 205 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 ZNF621Q6ZSS3 439 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 MAVSQ7Z434 540 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 ZZZ3Q8IYH5 903 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 TOR1AIP2Q8NFQ8 470 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 FNDC9Q8TBE3 224 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 RAB8BQ92930 207 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 ZNF845Q96IR2 970 aaPredicted RBP14.02□□□□□ -0.17
CLDND1-211ENST00000506575 OR52B2Q96RD2 323 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 RBM24Q9BX46 236 aaKnown RBP14.02□□□□□ -0.17
CLDND1-211ENST00000506575 ZNF350Q9GZX5 532 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 VIPAS39Q9H9C1 493 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 POLE3Q9NRF9 147 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 PAQR5Q9NXK6 330 aaPredicted RBP14.02□□□□□ -0.17
CLDND1-211ENST00000506575 JKAMPQ9P055 326 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 WDR45Q9Y484 360 aa14.02□□□□□ -0.17
CLDND1-211ENST00000506575 UQCRHLA0A096LP55 91 aa14.01□□□□□ -0.17
CLDND1-211ENST00000506575 SERINC4A6NH21 518 aa14.01□□□□□ -0.17
CLDND1-211ENST00000506575 RFXANKO14593 260 aa14.01□□□□□ -0.17
CLDND1-211ENST00000506575 POLR3GO15318 223 aaPredicted RBP14.01□□□□□ -0.17
CLDND1-211ENST00000506575 OIP5O43482 229 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms