RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ZNF697Q5TEC3 545 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 ZNF626Q68DY1 528 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 GSG1LQ6UXU4 331 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 TMUB2Q71RG4 321 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 CEACAM19Q7Z692 300 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 ADCK2Q7Z695 626 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 CDH26Q8IXH8 852 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 OR6T1Q8NGN1 323 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 OR1S1Q8NH92 325 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 ABHD4Q8TB40 342 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 SP7Q8TDD2 431 aaPredicted RBP14.83□□□□□ -0.03
SCLT1-208ENST00000506368 SLC35G5Q96KT7 338 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 MRI1Q9BV20 369 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 SGPP1Q9BX95 441 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 OR51I1Q9H343 314 aa14.83□□□□□ -0.03
SCLT1-208ENST00000506368 DDX31Q9H8H2 851 aaKnown RBP14.83□□□□□ -0.03
SCLT1-208ENST00000506368 NFKBIL1Q9UBC1 381 aaPredicted RBP14.83□□□□□ -0.03
SCLT1-208ENST00000506368 PTPRSQ13332 1948 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 GABARAPH6UMI1 98 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 EGFP01133 1207 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 APOC1P02654 83 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 TRIM23P36406 574 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 OMPP47874 163 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 DLX5P56178 289 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 TAS2R41P59536 307 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 ELAVL2Q12926 359 aaKnown RBP14.83□□□□□ -0.04
SCLT1-208ENST00000506368 ZNF311Q5JNZ3 666 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 SERPINA13PQ6UXR4 307 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
SCLT1-208ENST00000506368 CCDC36Q8IYA8 594 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 HS6ST3Q8IZP7 471 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 OR51Q1Q8NH59 317 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 SLC5A11Q8WWX8 675 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 PHYHIPQ92561 330 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 RAB8BQ92930 207 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 ZFP3Q96NJ6 502 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 FCRL4Q96PJ5 515 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 USB1Q9BQ65 265 aaKnown RBP14.83□□□□□ -0.04
SCLT1-208ENST00000506368 SLC19A3Q9BZV2 496 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 GAREM1Q9H706 876 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 CHST2Q9Y4C5 530 aa14.83□□□□□ -0.04
SCLT1-208ENST00000506368 SZT2Q5T011 3432 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 VWA8A3KMH1 1905 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 SLC5A10A0PJK1 596 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 K7ERQ8 282 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 VNN2O95498 520 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 HPP00738 406 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 GBAP04062 536 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 ANKRD34CP0C6C1 535 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 NAT2P11245 290 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 TBPL1P62380 186 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 RPS26P62854 115 aaKnown RBP14.82□□□□□ -0.04
SCLT1-208ENST00000506368 MLLT1Q03111 559 aaPredicted RBP14.82□□□□□ -0.04
SCLT1-208ENST00000506368 DECR1Q16698 335 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 C9orf50Q5SZB4 431 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 NXPE4Q6UWF7 544 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 PNPLA2Q96AD5 504 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 CPEB1Q9BZB8 566 aaKnown RBP14.82□□□□□ -0.04
SCLT1-208ENST00000506368 SUV39H2Q9H5I1 410 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 HRASLSQ9HDD0 168 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 IL23AQ9NPF7 189 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 SIRT3Q9NTG7 399 aaPredicted RBP14.82□□□□□ -0.04
SCLT1-208ENST00000506368 NLGN3Q9NZ94 848 aa14.82□□□□□ -0.04
SCLT1-208ENST00000506368 CXXC1Q9P0U4 656 aaPredicted RBP14.82□□□□□ -0.04
SCLT1-208ENST00000506368 PRG3Q9Y2Y8 225 aaPredicted RBP14.82□□□□□ -0.04
SCLT1-208ENST00000506368 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.81□□□□□ -0.04
SCLT1-208ENST00000506368 ANXA2P2A6NMY6 339 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 B4GALT3O60512 393 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 FGBP02675 491 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 NPPBP16860 134 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 NRG3P56975 720 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 KIAA1024LP59773 190 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 POLR2LP62875 67 aaKnown RBP14.81□□□□□ -0.04
SCLT1-208ENST00000506368 Q6ZTK2 550 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 OVCH1Q7RTY7 1134 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 KRT78Q8N1N4 520 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 SIRT6Q8N6T7 355 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 OR6K3Q8NGY3 331 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 OR4Q3Q8NH05 313 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 ACOT11Q8WXI4 607 aaPredicted RBP14.81□□□□□ -0.04
SCLT1-208ENST00000506368 HERVK_113Q902F9 699 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 CNOT9Q92600 299 aaKnown RBP14.81□□□□□ -0.04
SCLT1-208ENST00000506368 MRPS24Q96EL2 167 aaKnown RBP14.81□□□□□ -0.04
SCLT1-208ENST00000506368 C1QTNF6Q9BXI9 259 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 MS4A7Q9GZW8 240 aaPredicted RBP14.81□□□□□ -0.04
SCLT1-208ENST00000506368 SAV1Q9H4B6 383 aaPredicted RBP14.81□□□□□ -0.04
SCLT1-208ENST00000506368 KLHL9Q9P2J3 617 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 SLC6A5Q9Y345 797 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 DAPL1A0PJW8 107 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 UBE2QL1A1L167 161 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 SLC22A31A6NKX4 558 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 APOC3P02656 99 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 ATP1B1P05026 303 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 NDUFV2P19404 249 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 DRD5P21918 477 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 VEGFCP49767 419 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 MPPED2Q15777 294 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 TMEM240Q5SV17 173 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 UQCC3Q6UW78 93 aa14.81□□□□□ -0.04
SCLT1-208ENST00000506368 ZNF620Q6ZNG0 422 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms