RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 EPPINO95925 133 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 CSTAP01040 98 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 ZNF708P17019 499 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 CAPN3P20807 821 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 EIF1P41567 113 aaKnown RBP15.1■□□□□ 0.01
SNCA-209ENST00000506244 B3GALT5-AS1P59052 145 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 DSTNP60981 165 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 CBFBQ13951 182 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 HSPB2Q16082 182 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 PLPPR5Q32ZL2 321 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 COX20Q5RI15 118 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 AP1ARQ63HQ0 302 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 NSUN5P2Q63ZY6 315 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 ARSKQ6UWY0 536 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 FRRS1Q6ZNA5 592 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 LRRC74BQ6ZQY2 392 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 CHMP1BQ7LBR1 199 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 GTPBP8Q8N3Z3 284 aaPredicted RBP15.1■□□□□ 0.01
SNCA-209ENST00000506244 PAIP1Q9H074 479 aaKnown RBP15.1■□□□□ 0.01
SNCA-209ENST00000506244 ZNF385DQ9H6B1 395 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 CALHM2Q9HA72 323 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 CHST11Q9NPF2 352 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 MED17Q9NVC6 651 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 KLHL14Q9P2G3 628 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 RNF6Q9Y252 685 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 CARD8Q9Y2G2 431 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 L3MBTL1Q9Y468 752 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 PCDHB14Q9Y5E9 798 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 AP4B1Q9Y6B7 739 aa15.1■□□□□ 0.01
SNCA-209ENST00000506244 H3BML4 177 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 CLIC1O00299 241 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 DYNC1I1O14576 645 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 ME2P23368 584 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 ELK4P28324 431 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 TIMP3P35625 211 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 ADH7P40394 386 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 CCR4P51679 360 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 CRISP3P54108 245 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 CLDN18P56856 261 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 RPS3AP61247 264 aaKnown RBP15.09■□□□□ 0.01
SNCA-209ENST00000506244 SRYQ05066 204 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 TMEM44Q2T9K0 475 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 GTDC1Q4AE62 458 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 CMIPQ8IY22 773 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 AURKBQ96GD4 344 aaPredicted RBP15.09■□□□□ 0.01
SNCA-209ENST00000506244 ZFP3Q96NJ6 502 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 TRIB1Q96RU8 372 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 NDUFAF1Q9Y375 327 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 GPC6Q9Y625 555 aaPredicted RBP15.09■□□□□ 0.01
SNCA-209ENST00000506244 PCNX1Q96RV3 2341 aa15.09■□□□□ 0.01
SNCA-209ENST00000506244 MBD3L4A6NDZ8 208 aaPredicted RBP15.08■□□□□ 0
SNCA-209ENST00000506244 MBD3L3A6NE82 208 aaPredicted RBP15.08■□□□□ 0
SNCA-209ENST00000506244 MBD3L5A6NJ08 208 aaPredicted RBP15.08■□□□□ 0
SNCA-209ENST00000506244 IL2RAP01589 272 aa15.08■□□□□ 0
SNCA-209ENST00000506244 CHRM4P08173 479 aa15.08■□□□□ 0
SNCA-209ENST00000506244 ETFAP13804 333 aa15.08■□□□□ 0
SNCA-209ENST00000506244 HOXB9P17482 250 aaPredicted RBP15.08■□□□□ 0
SNCA-209ENST00000506244 ADH6P28332 368 aa15.08■□□□□ 0
SNCA-209ENST00000506244 HTR1EP28566 365 aa15.08■□□□□ 0
SNCA-209ENST00000506244 MVDP53602 400 aa15.08■□□□□ 0
SNCA-209ENST00000506244 SKP2Q13309 424 aa15.08■□□□□ 0
SNCA-209ENST00000506244 FGFBP1Q14512 234 aa15.08■□□□□ 0
SNCA-209ENST00000506244 MAPRE2Q15555 327 aa15.08■□□□□ 0
SNCA-209ENST00000506244 SYPL1Q16563 259 aa15.08■□□□□ 0
SNCA-209ENST00000506244 UBQLNLQ8IYU4 475 aa15.08■□□□□ 0
SNCA-209ENST00000506244 ANKFN1Q8N957 763 aa15.08■□□□□ 0
SNCA-209ENST00000506244 OR5W2Q8NH69 310 aa15.08■□□□□ 0
SNCA-209ENST00000506244 MBD3L2Q8NHZ7 208 aaPredicted RBP15.08■□□□□ 0
SNCA-209ENST00000506244 ARSGQ96EG1 525 aa15.08■□□□□ 0
SNCA-209ENST00000506244 TM9SF2Q99805 663 aa15.08■□□□□ 0
SNCA-209ENST00000506244 TUBA1CQ9BQE3 449 aa15.08■□□□□ 0
SNCA-209ENST00000506244 LAT2Q9GZY6 243 aa15.08■□□□□ 0
SNCA-209ENST00000506244 SLC38A1Q9H2H9 487 aa15.08■□□□□ 0
SNCA-209ENST00000506244 SLC52A3Q9NQ40 469 aa15.08■□□□□ 0
SNCA-209ENST00000506244 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.08■□□□□ 0
SNCA-209ENST00000506244 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.08■□□□□ 0
SNCA-209ENST00000506244 ICAM5Q9UMF0 924 aa15.08■□□□□ 0
SNCA-209ENST00000506244 ARHGAP21Q5T5U3 1957 aa15.07■□□□□ 0
SNCA-209ENST00000506244 A0A0G2JNJ9 132 aa15.07■□□□□ 0
SNCA-209ENST00000506244 CLCA1A8K7I4 914 aa15.07■□□□□ 0
SNCA-209ENST00000506244 EVPLLA8MZ36 301 aa15.07■□□□□ 0
SNCA-209ENST00000506244 BCHEP06276 602 aa15.07■□□□□ 0
SNCA-209ENST00000506244 DBIP07108 87 aaKnown RBP15.07■□□□□ 0
SNCA-209ENST00000506244 SNRPB2P08579 225 aaKnown RBP15.07■□□□□ 0
SNCA-209ENST00000506244 LINGO3P0C6S8 592 aa15.07■□□□□ 0
SNCA-209ENST00000506244 UBTFL6P0CB48 400 aaPredicted RBP15.07■□□□□ 0
SNCA-209ENST00000506244 PGCP20142 388 aa15.07■□□□□ 0
SNCA-209ENST00000506244 STARP49675 285 aa15.07■□□□□ 0
SNCA-209ENST00000506244 RNF144AP50876 292 aaPredicted RBP15.07■□□□□ 0
SNCA-209ENST00000506244 CHRNEQ04844 493 aa15.07■□□□□ 0
SNCA-209ENST00000506244 RGNQ15493 299 aa15.07■□□□□ 0
SNCA-209ENST00000506244 SLC25A35Q3KQZ1 300 aa15.07■□□□□ 0
SNCA-209ENST00000506244 PAGE3Q5JUK9 113 aa15.07■□□□□ 0
SNCA-209ENST00000506244 PRAMEF8Q5VWM4 474 aa15.07■□□□□ 0
SNCA-209ENST00000506244 PRAMEF7Q5VXH5 474 aa15.07■□□□□ 0
SNCA-209ENST00000506244 CGB2Q6NT52 195 aa15.07■□□□□ 0
SNCA-209ENST00000506244 CBLN3Q6UW01 205 aa15.07■□□□□ 0
SNCA-209ENST00000506244 DHDDSQ86SQ9 333 aa15.07■□□□□ 0
SNCA-209ENST00000506244 GRAMD2AQ8IUY3 354 aa15.07■□□□□ 0
SNCA-209ENST00000506244 PEX5LQ8IYB4 626 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms