RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 KLHL12Q53G59 568 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 BHLHB9Q6PI77 547 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 SSX6Q7RTT6 188 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 PRSS45Q7RTY3 260 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 FBXL6Q8N531 539 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 OR56A1Q8NGH5 318 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 OR51Q1Q8NH59 317 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 DOK4Q8TEW6 326 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 PGLYRP3Q96LB9 341 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 CCDC86Q9H6F5 360 aaKnown RBP11.05□□□□□ -0.64
UBE3D-206ENST00000505226 SLC6A20Q9NP91 592 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 DAPL1A0PJW8 107 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 M6PRP20645 277 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 PRKAR1BP31321 381 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 GSG1Q2KHT4 349 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
UBE3D-206ENST00000505226 CDONQ4KMG0 1287 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 CCNJQ5T5M9 372 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 PRAMEF8Q5VWM4 474 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 PRAMEF7Q5VXH5 474 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 CNKSR3Q6P9H4 555 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 ANKRD33Q7Z3H0 272 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 C16orf62Q7Z3J2 963 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 PXKQ7Z7A4 578 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 CDS1Q92903 461 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 ZFP3Q96NJ6 502 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 FERD3LQ96RJ6 166 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 TTTY10Q9BZA0 68 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 RANBP3Q9H6Z4 567 aaPredicted RBP11.05□□□□□ -0.64
UBE3D-206ENST00000505226 NLGN3Q9NZ94 848 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 TMEM5Q9Y2B1 443 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 MRPS7Q9Y2R9 242 aaKnown RBP11.05□□□□□ -0.64
UBE3D-206ENST00000505226 GPR171O14626 319 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 PLPP2O43688 288 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 HPXP02790 462 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 MT-ND4P03905 459 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ANXA3P12429 323 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 SNRPBP14678 240 aaKnown RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 HTR2AP28223 471 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 HCCSP53701 268 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ERVFC1P60507 584 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ERVK-21P61565 698 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 SHC2P98077 582 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ANGPT1Q15389 498 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 PRPF38BQ5VTL8 546 aaKnown RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF836Q6ZNA1 936 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 SPERTQ8NA61 448 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 OR7G2Q8NG99 324 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 OR5J2Q8NH18 312 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 HAVCR2Q8TDQ0 301 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 C4orf36Q96KX1 117 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 PCBD2Q9H0N5 130 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 DPAGT1Q9H3H5 408 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 DIABLOQ9NR28 239 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 KCMF1Q9P0J7 381 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 APOBEC3BQ9UH17 382 aaKnown RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF223Q9UK11 482 aaPredicted RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF443Q9Y2A4 671 aaPredicted RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 CHD9Q3L8U1 2897 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 B8ZZF3 427 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 WNT1P04628 370 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 HMGN1P05114 100 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 LINC00271P0C7V0 271 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 GKN3PP0CG01 181 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ATF1P18846 271 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 CSNK2A2P19784 350 aaPredicted RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 PAICSP22234 425 aaKnown RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 SRP54P61011 504 aaKnown RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ST8SIA6P61647 398 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 PRR5P85299 388 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 CDK3Q00526 305 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF85Q03923 595 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 EXOSC2Q13868 293 aaKnown RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 CAMK1Q14012 370 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 MAPK14Q16539 360 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 TMEM44Q2T9K0 475 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 CD276Q5ZPR3 534 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 GPR139Q6DWJ6 353 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 C12orf66Q96MD2 445 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 RBP7Q96R05 134 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 TEAD3Q99594 435 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 CACNG6Q9BXT2 260 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 KLHL1Q9NR64 748 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 PLEKHM1Q9Y4G2 1056 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 OR1A2Q9Y585 309 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 SCN2AQ99250 2005 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 J3QLW9 94 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ADRB1P08588 477 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF19P17023 458 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 IKZF1Q13422 519 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 PYHIN1Q6K0P9 492 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 HEPHL1Q6MZM0 1159 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 CACUL1Q86Y37 369 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 IZUMO1Q8IYV9 350 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 MARVELD3Q96A59 401 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 RSPRY1Q96DX4 576 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 PEX11GQ96HA9 241 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 OR51V1Q9H2C8 321 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms