RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 RFX3P48380 749 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 ESRRGP62508 458 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 GANABQ14697 944 aaKnown RBP9.33□□□□□ -0.92
DDX41-203ENST00000504781 PCOLCEQ15113 449 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 PDK3Q15120 406 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 NPTX1Q15818 432 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 C3orf38Q5JPI3 329 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 ZNF770Q6IQ21 691 aaPredicted RBP9.33□□□□□ -0.92
DDX41-203ENST00000504781 C1orf94Q6P1W5 598 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 KIRREL2Q6UWL6 708 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 USP51Q70EK9 711 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 ZAR1Q86SH2 424 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 TSPYL5Q86VY4 417 aaPredicted RBP9.33□□□□□ -0.92
DDX41-203ENST00000504781 HS3ST5Q8IZT8 346 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 SLC5A8Q8N695 610 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 ADAMTS16Q8TE57 1224 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 TMCO6Q96DC7 493 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 OMA1Q96E52 524 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 IP6K3Q96PC2 410 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 GAL3ST4Q96RP7 486 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 CCNL2Q96S94 520 aaPredicted RBP9.33□□□□□ -0.92
DDX41-203ENST00000504781 ADOQ96SZ5 270 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 BARD1Q99728 777 aaKnown RBP9.33□□□□□ -0.92
DDX41-203ENST00000504781 DGCR6LQ9BY27 220 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 DEFB126Q9BYW3 111 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 LAT2Q9GZY6 243 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 TOR3AQ9H497 397 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 EXOSC3Q9NQT5 275 aaKnown RBP9.33□□□□□ -0.92
DDX41-203ENST00000504781 KRT84Q9NSB2 600 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 RHCGQ9UBD6 479 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 MYOTQ9UBF9 498 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 ZNF223Q9UK11 482 aaPredicted RBP9.33□□□□□ -0.92
DDX41-203ENST00000504781 POFUT2Q9Y2G5 429 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 PCDHGA6Q9Y5G7 932 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 HS3ST3B1Q9Y662 390 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 HSPE1-MOB4S4R3N1 261 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 FAM208BQ5VWN6 2430 aa9.33□□□□□ -0.92
DDX41-203ENST00000504781 DMXL2Q8TDJ6 3036 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 KNTC1P50748 2209 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 NSG1A0A0A6YYJ2 146 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 TRBV11-1A0A0K0K1C0 115 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 TEX51A0A1B0GUA7 166 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 TMEM200CA6NKL6 621 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 CLDN24A6NM45 220 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 ALG1L2C9J202 215 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 STMND1H3BQB6 276 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 GTPBP1O00178 669 aaKnown RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 SOCS6O14544 535 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 FADS1O60427 444 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 PPM1BO75688 479 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 HPP00738 406 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 ADAP00813 363 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 GASTP01350 101 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 ITGAMP11215 1152 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 CYP4B1P13584 511 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 GSTM3P21266 225 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 CBLP22681 906 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 ELAVL4P26378 380 aaKnown RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 RBMS1P29558 406 aaKnown RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 RYKP34925 604 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 SLC6A8P48029 635 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 TMED10P49755 219 aaKnown RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 PLCXD2Q0VAA5 305 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 NPRL3Q12980 569 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 CAMK2BQ13554 666 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 OR1Q1Q15612 314 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 BTBD16Q32M84 506 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 FNDC7Q5VTL7 733 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 PODNL1Q6PEZ8 512 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 ULK3Q6PHR2 472 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 GDF7Q7Z4P5 450 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 HMGN2P46Q86SG4 172 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 MISPQ8IVT2 679 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 DND1Q8IYX4 353 aaKnown RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 ARMC10Q8N2F6 343 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 PARP8Q8N3A8 854 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 OR11G2Q8NGC1 345 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 SLC22A8Q8TCC7 542 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 SLC7A13Q8TCU3 470 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 GNPDA2Q8TDQ7 276 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 CT55Q8WUE5 264 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 DNAJA4Q8WW22 397 aaPredicted RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 CYGBQ8WWM9 190 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 ACOT11Q8WXI4 607 aaPredicted RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 CNOT9Q92600 299 aaKnown RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 EFHD2Q96C19 240 aaPredicted RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 C8orf44Q96CB5 159 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 SLC41A3Q96GZ6 507 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 MPP4Q96JB8 637 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 GRIP2Q9C0E4 1043 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 KRCC1Q9NPI7 259 aaPredicted RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 PAPOLBQ9NRJ5 636 aaKnown RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 KIF17Q9P2E2 1029 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 YARS2Q9Y2Z4 477 aaKnown RBP9.32□□□□□ -0.92
DDX41-203ENST00000504781 PKD1L2Q7Z442 2459 aa9.32□□□□□ -0.92
DDX41-203ENST00000504781 LAMA5O15230 3695 aa9.31□□□□□ -0.92
DDX41-203ENST00000504781 A0A087WUU8 490 aa9.31□□□□□ -0.92
DDX41-203ENST00000504781 NPIPA5A0A0B4J1W7 369 aa9.31□□□□□ -0.92
DDX41-203ENST00000504781 TRBV4-1A0A0J9YWV2 114 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms