RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 RASGRP4Q8TDF6 673 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 CHFRQ96EP1 664 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ANAPC13Q9BS18 74 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ATG5Q9H1Y0 275 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 TXNL4BQ9NX01 149 aaKnown RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 OR6C3Q9NZP0 311 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 SIX4Q9UIU6 781 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 NCAPD2Q15021 1401 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ATP10DQ9P241 1426 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 XIRP1Q702N8 1843 aaKnown RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 DLGAP1O14490 977 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 RAD51DO75771 328 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 CSF1P09603 554 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 UBBP0CG47 229 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 BMP4P12644 408 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 PRR5P85299 388 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 SMAGPQ0VAQ4 97 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF770Q6IQ21 691 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 LDB1Q86U70 411 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 OR2T35Q8NGX2 323 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 CHURC1Q8WUH1 139 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 DNASE1L2Q92874 299 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 DTD2Q96FN9 168 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF641Q96N77 438 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 COL21A1Q96P44 957 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 TMEM106CQ9BVX2 250 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 JAM3Q9BX67 310 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 PTGES2Q9H7Z7 377 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 SEMA4GQ9NTN9 838 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 BARHL2Q9NY43 387 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 EGFL7Q9UHF1 273 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 MEMO1Q9Y316 297 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 CMAHPQ9Y471 501 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 USP31Q70CQ4 1352 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 A0A1B0GVC2 190 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 AGPAT2O15120 278 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 OGG1O15527 345 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 TRAF3IP2O43734 574 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ALOX12BO75342 701 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 CNTN5O94779 1100 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 SLCO2B1O94956 709 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 VAMP5O95183 116 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 GLUD1P00367 558 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ALDOBP05062 364 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 C8GP07360 202 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 CSF2RBP32927 897 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 KLK7P49862 253 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 HMGCS2P54868 508 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 CTBP2P56545 445 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 KLF1Q13351 362 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 PPIGQ13427 754 aaKnown RBP eCLIP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 RNASE12Q5GAN4 147 aaKnown RBP5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF766Q5HY98 468 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 TOMM20LQ6UXN7 152 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ZPBP2Q6X784 338 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 TMEM126BQ8IUX1 230 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 FAM24BQ8N5W8 94 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ZNF439Q8NDP4 499 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 OR13J1Q8NGT2 312 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 OR6K6Q8NGW6 343 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 RHOXF1Q8NHV9 184 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 WDR20Q8TBZ3 569 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 BRI3BPQ8WY22 251 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 DIO2Q92813 273 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 GGHQ92820 318 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 HHIPL1Q96JK4 782 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 ITPAQ9BY32 194 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 WDR45Q9Y484 360 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 MON2Q7Z3U7 1717 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 SHPRHQ149N8 1683 aa5.89□□□□□ -1.47
CLCN3-204ENST00000504131 XPNPEP2O43895 674 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 MMP7P09237 267 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 UCP1P25874 307 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 TAF6P49848 677 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 BLKP51451 505 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ERVPABLB-1P60509 514 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ARHGAP8P85298 464 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ACSM3Q53FZ2 586 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 IGF2-ASQ6U949 168 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 CHRDL2Q6WN34 429 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 LHFPL4Q7Z7J7 247 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 WDFY1Q8IWB7 410 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 LAS2Q8IYD9 372 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ZSCAN4Q8NAM6 433 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 OR4A4PQ8NGN8 299 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 OR14A16Q8NHC5 309 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 NFKBIDQ8NI38 313 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 TBCKQ8TEA7 893 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 SLC39A7Q92504 469 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 ACDQ96AP0 544 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 TLCD1Q96CP7 247 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 SLC38A2Q96QD8 506 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 KCTD15Q96SI1 283 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-204ENST00000504131 CD180Q99467 661 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 SEPHS2Q99611 448 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 IL12RB2Q99665 862 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 BOCQ9BWV1 1114 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 SGPP1Q9BX95 441 aa5.88□□□□□ -1.47
CLCN3-204ENST00000504131 SLC12A9Q9BXP2 914 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms