RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 CHI3L2Q15782 390 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 KLHL26Q53HC5 615 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 EXOSC6Q5RKV6 272 aaKnown RBP10.74□□□□□ -0.69
MED28-203ENST00000503945 VWA1Q6PCB0 445 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 ZNF474Q6S9Z5 364 aaPredicted RBP10.74□□□□□ -0.69
MED28-203ENST00000503945 ESPNLQ6ZVH7 1005 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 ZAR1Q86SH2 424 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 RIMKLAQ8IXN7 391 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 KIRREL3Q8IZU9 778 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 LILRA2Q8N149 483 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 NUDT8Q8WV74 236 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 OSTF1Q92882 214 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 MBD6Q96DN6 1003 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 REXO5Q96IC2 774 aaKnown RBP10.74□□□□□ -0.69
MED28-203ENST00000503945 SMR3AQ99954 134 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 MED18Q9BUE0 208 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 OPN3Q9H1Y3 402 aaPredicted RBP10.74□□□□□ -0.69
MED28-203ENST00000503945 CXorf36Q9H7Y0 433 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 AKTIPQ9H8T0 292 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 PLEKHF2Q9H8W4 249 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 FANCFQ9NPI8 374 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 TIGARQ9NQ88 270 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 PLSCR4Q9NRQ2 329 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 GLRX2Q9NS18 164 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 MED17Q9NVC6 651 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 EMC9Q9Y3B6 208 aa10.74□□□□□ -0.69
MED28-203ENST00000503945 DOCK7Q96N67 2140 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 C7orf72A4D263 438 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 GJE1A6NN92 205 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 ITM2AO43736 263 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 AQP8O94778 261 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 CGAP01215 116 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 HRGP04196 525 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 PABPC4LP0CB38 370 aaKnown RBP10.73□□□□□ -0.69
MED28-203ENST00000503945 IL11P20809 199 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 MATN1P21941 496 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 ADH6P28332 368 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 UGT2B10P36537 528 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 SLC1A6P48664 564 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 ATP12AP54707 1039 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 HBA1P69905 142 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 ZNF844Q08AG5 666 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 STX3Q13277 289 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 POU4F3Q15319 338 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 PLPPR5Q32ZL2 321 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 CEP85LQ5SZL2 805 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 DCST2Q5T1A1 773 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 HBMQ6B0K9 141 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 Q71RC1 249 aaPredicted RBP10.73□□□□□ -0.69
MED28-203ENST00000503945 C6orf120Q7Z4R8 191 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 GGNQ86UU5 652 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 OR10D3Q8NH80 312 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 SFXN5Q8TD22 340 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 ARL8AQ96BM9 186 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 GMPPAQ96IJ6 420 aaPredicted RBP10.73□□□□□ -0.69
MED28-203ENST00000503945 PKNOX2Q96KN3 472 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 PPP1R36Q96LQ0 422 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 RNF145Q96MT1 663 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 PAIP2Q9BPZ3 127 aaKnown RBP10.73□□□□□ -0.69
MED28-203ENST00000503945 DPY30Q9C005 99 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
MED28-203ENST00000503945 NEUROD4Q9HD90 331 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 GPATCH2Q9NW75 528 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 KLHL28Q9NXS3 571 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 RAP2CQ9Y3L5 183 aa10.73□□□□□ -0.69
MED28-203ENST00000503945 MED12Q93074 2177 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 PRSS51A0A1B0GVH4 220 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 ZNF195O14628 629 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 TNFSF11O14788 317 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 CXCL13O43927 109 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 ZNF500O60304 480 aaPredicted RBP10.72□□□□□ -0.69
MED28-203ENST00000503945 ATE1O95260 518 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 LINGO3P0C6S8 592 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 PSMA4P25789 261 aaKnown RBP10.72□□□□□ -0.69
MED28-203ENST00000503945 P2RX1P51575 399 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 C21orf58P58505 322 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 LTBQ06643 244 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 PDCD2Q16342 344 aaPredicted RBP10.72□□□□□ -0.69
MED28-203ENST00000503945 EXOC3L2Q2M3D2 409 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 ANXA8L1Q5VT79 327 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 PAMR1Q6UXH9 720 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 ZNF781Q8N8C0 355 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 WFDC11Q8NEX6 87 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 OR2V1Q8NHB1 315 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 OR7D2Q96RA2 312 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 SDF2Q99470 211 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 KLHL4Q9C0H6 718 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 ASIC5Q9NY37 505 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 CARD8Q9Y2G2 431 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 DTNAQ9Y4J8 743 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 GPC6Q9Y625 555 aaPredicted RBP10.72□□□□□ -0.69
MED28-203ENST00000503945 KCNE3Q9Y6H6 103 aa10.72□□□□□ -0.69
MED28-203ENST00000503945 A0A0J9YW62 118 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 RNASET2O00584 256 aaKnown RBP10.71□□□□□ -0.69
MED28-203ENST00000503945 EIF4E2O60573 245 aaKnown RBP10.71□□□□□ -0.69
MED28-203ENST00000503945 STX11O75558 287 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 SOAT1P35610 550 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 SLC6A8P48029 635 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 ZNF117Q03924 483 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 CD226Q15762 336 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms