RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ADCK1Q86TW2 530 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 MCATQ8IVS2 390 aaKnown RBP10.76□□□□□ -0.69
USP46-204ENST00000503060 CLIP4Q8N3C7 705 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 ARHGEF39Q8N4T4 335 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 B3GNT7Q8NFL0 401 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 LMX1AQ8TE12 382 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 FOXQ1Q9C009 403 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 PIGUQ9H490 435 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 ANKHQ9HCJ1 492 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 ZNF443Q9Y2A4 671 aaPredicted RBP10.76□□□□□ -0.69
USP46-204ENST00000503060 IFT52Q9Y366 437 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 FAM170BA6NMN3 283 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 CYP7B1O75881 506 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 CLUP10909 449 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 CD46P15529 392 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 MAOBP27338 520 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 TGFBR2P37173 567 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 FASLGP48023 281 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 EMP3P54852 163 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP46-204ENST00000503060 MGAT2Q10469 447 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 ST3GAL4Q11206 333 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 TRAM2Q15035 370 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 VASH1Q7L8A9 365 aaPredicted RBP10.76□□□□□ -0.69
USP46-204ENST00000503060 GKN2Q86XP6 184 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 PHC2Q8IXK0 858 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 GJD3Q8N144 294 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 OR9A4Q8NGU2 314 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 ZNF675Q8TD23 568 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 DIO2Q92813 273 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 SLC38A4Q969I6 547 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 ANKRD9Q96BM1 317 aaPredicted RBP10.76□□□□□ -0.69
USP46-204ENST00000503060 IL4I1Q96RQ9 567 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 SDF2Q99470 211 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 ITPAQ9BY32 194 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 SMOC1Q9H4F8 434 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 PLGRKTQ9HBL7 147 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 SEMA4GQ9NTN9 838 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 MAT2BQ9NZL9 334 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 CLCA2Q9UQC9 943 aa10.76□□□□□ -0.69
USP46-204ENST00000503060 A0A087WUU8 490 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 EFCAB10A6NFE3 127 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CPSF4LA6NMK7 179 aaKnown RBP10.75□□□□□ -0.69
USP46-204ENST00000503060 SLC22A1O15245 554 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 IFI6P09912 130 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CCNYL3P0C7X3 344 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CKMT1AP12532 417 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 EDN3P14138 238 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 TNNI3P19429 210 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 AVPR1BP47901 424 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 RGS8P57771 180 aaPredicted RBP10.75□□□□□ -0.69
USP46-204ENST00000503060 CAMK2DQ13557 499 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 IRF3Q14653 427 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 PRICKLE4Q2TBC4 344 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 ENTPD8Q5MY95 495 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CASP12Q6UXS9 341 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 GATAD2BQ8WXI9 593 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 GPA33Q99795 319 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 USB1Q9BQ65 265 aaKnown RBP10.75□□□□□ -0.69
USP46-204ENST00000503060 PCED1AQ9H1Q7 454 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 OCEL1Q9H607 264 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CACYBPQ9HB71 228 aaKnown RBP10.75□□□□□ -0.69
USP46-204ENST00000503060 NECTIN3Q9NQS3 549 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 RXFP3Q9NSD7 469 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 NUDT15Q9NV35 164 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CNOT2Q9NZN8 540 aaKnown RBP10.75□□□□□ -0.69
USP46-204ENST00000503060 DOLKQ9UPQ8 538 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 M0R082 166 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CHST10O43529 356 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 SSX5O60225 188 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 ENTPD6O75354 484 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 PROS1P07225 676 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 INHBBP09529 407 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CD36P16671 472 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 STAT5AP42229 794 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CAPZBP47756 277 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 ST3GAL3Q11203 375 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 PRTGQ2VWP7 1150 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 TMEM201Q5SNT2 666 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CCNJQ5T5M9 372 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 ZCCHC12Q6PEW1 402 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 ZNF836Q6ZNA1 936 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CDRT4Q8N9R6 151 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 CADM4Q8NFZ8 388 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 TRUB1Q8WWH5 349 aaKnown RBP10.75□□□□□ -0.69
USP46-204ENST00000503060 ZNF350Q9GZX5 532 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 ANKRD19PQ9H560 264 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 SLC25A19Q9HC21 320 aa10.75□□□□□ -0.69
USP46-204ENST00000503060 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP46-204ENST00000503060 LILRA5A6NI73 299 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 CDC123O75794 336 aaPredicted RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 CLPXO76031 633 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 ACAA1P09110 424 aaPredicted RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 CT62P0C5K7 136 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 IL11P20809 199 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 GSTM3P21266 225 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 SLC15A1P46059 708 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 LSM3P62310 102 aaKnown RBP10.74□□□□□ -0.69
USP46-204ENST00000503060 HOXC5Q00444 222 aa10.74□□□□□ -0.69
USP46-204ENST00000503060 OCA2Q04671 838 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms