RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MUL1Q969V5 352 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 NMD3Q96D46 503 aaKnown RBP20.28■□□□□ 0.84
PTPN13-205ENST00000502971 Q96MT0 163 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 SIGLEC11Q96RL6 698 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 COPS4Q9BT78 406 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 SLC35A3Q9Y2D2 325 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 GPR179Q6PRD1 2367 aa20.28■□□□□ 0.84
PTPN13-205ENST00000502971 EFCAB7A8K855 629 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 AGRPO00253 132 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 HEXBP07686 556 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 NBL1P41271 181 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 SMSP52788 366 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 GINS1Q14691 196 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 EBPQ15125 230 aaKnown RBP20.27■□□□□ 0.84
PTPN13-205ENST00000502971 KLHL26Q53HC5 615 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 HLA-DQA1Q5Y7H0 255 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 B3GNT6Q6ZMB0 384 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 AHSA2Q719I0 299 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 AGBL5Q8NDL9 886 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 OR8J1Q8NGP2 316 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 OR4C3Q8NH37 302 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 TEX47Q8TBZ9 253 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 TMEM239Q8WW34 195 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 HS6ST2Q96MM7 605 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 LHPPQ9H008 270 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 UBQLN4Q9NRR5 601 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 CNIH4Q9P003 139 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 FER1L5A0AVI2 2057 aa20.27■□□□□ 0.84
PTPN13-205ENST00000502971 A0A0B4J2E0 115 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 A0A1B0GX12 115 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 TO15178 435 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 CHP2O43745 196 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 NTN1O95631 604 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 DCKP27707 260 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 ADH7P40394 386 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 TMEM201Q5SNT2 666 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 TCEAL6Q6IPX3 200 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 SLC29A4Q7RTT9 530 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 C9orf40Q8IXQ3 194 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 ZNF440Q8IYI8 595 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 GGHQ92820 318 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 TCEAL3Q969E4 200 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 EFHD2Q96C19 240 aaPredicted RBP20.27■□□□□ 0.83
PTPN13-205ENST00000502971 RHNO1Q9BSD3 238 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 POLDIP3Q9BY77 421 aaKnown RBP20.27■□□□□ 0.83
PTPN13-205ENST00000502971 APMAPQ9HDC9 416 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 PTTG2Q9NZH5 202 aa20.27■□□□□ 0.83
PTPN13-205ENST00000502971 ZNF223Q9UK11 482 aaPredicted RBP20.27■□□□□ 0.83
PTPN13-205ENST00000502971 VSTM2BA6NLU5 285 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 ZNF99A8MXY4 864 aaPredicted RBP20.26■□□□□ 0.83
PTPN13-205ENST00000502971 M0R129 80 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 FLRT2O43155 660 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 CSTAP01040 98 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 MT-ND2P03891 347 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 LANCL3Q6ZV70 420 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 CLDN22Q8N7P3 220 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 POGLUT1Q8NBL1 392 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 FAR1Q8WVX9 515 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 OSTF1Q92882 214 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 GAL3ST4Q96RP7 486 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 LMF1Q96S06 567 aa20.26■□□□□ 0.83
PTPN13-205ENST00000502971 IDSB3KWA1 339 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 PIP5K1CO60331 668 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 CDK1P06493 297 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 SH3BGRP55822 239 aaPredicted RBP20.25■□□□□ 0.83
PTPN13-205ENST00000502971 PSPHP78330 225 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 PRKCDQ05655 676 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 SLC27A4Q6P1M0 643 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 WDR88Q6ZMY6 472 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 SHISA6Q6ZSJ9 500 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 ANKRD37Q7Z713 158 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 MRGPREQ86SM8 312 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 MEX3DQ86XN8 651 aaKnown RBP20.25■□□□□ 0.83
PTPN13-205ENST00000502971 C17orf47Q8NEP4 570 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 WDR36Q8NI36 951 aaKnown RBP20.25■□□□□ 0.83
PTPN13-205ENST00000502971 RORBQ92753 470 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 ISOC1Q96CN7 298 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 RNF31Q96EP0 1072 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 MPP4Q96JB8 637 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 WWTR1Q9GZV5 400 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 SLC26A1Q9H2B4 701 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 DSN1Q9H410 356 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 EGLN3Q9H6Z9 239 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 IL20Q9NYY1 176 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 TVP23BQ9NYZ1 205 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 CNOT2Q9NZN8 540 aaKnown RBP20.25■□□□□ 0.83
PTPN13-205ENST00000502971 FLRT3Q9NZU0 649 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 TMEM5Q9Y2B1 443 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 SEC16AO15027 2179 aa20.25■□□□□ 0.83
PTPN13-205ENST00000502971 A0A1B0GWA3 101 aa20.24■□□□□ 0.83
PTPN13-205ENST00000502971 EFCAB10A6NFE3 127 aa20.24■□□□□ 0.83
PTPN13-205ENST00000502971 FOXD2O60548 495 aaPredicted RBP20.24■□□□□ 0.83
PTPN13-205ENST00000502971 CPNE3O75131 537 aaKnown RBP20.24■□□□□ 0.83
PTPN13-205ENST00000502971 ALOX12BO75342 701 aa20.24■□□□□ 0.83
PTPN13-205ENST00000502971 CYC1P08574 325 aa20.24■□□□□ 0.83
PTPN13-205ENST00000502971 HPGDP15428 266 aa20.24■□□□□ 0.83
PTPN13-205ENST00000502971 RBM34P42696 430 aaKnown RBP20.24■□□□□ 0.83
PTPN13-205ENST00000502971 GPR4P46093 362 aa20.24■□□□□ 0.83
PTPN13-205ENST00000502971 PCYT1AP49585 367 aa20.24■□□□□ 0.83
PTPN13-205ENST00000502971 OCLNQ16625 522 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms