RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 BARX1Q9HBU1 254 aaPredicted RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 MID1IP1Q9NPA3 183 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 FAIMQ9NVQ4 179 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 OXSMQ9NWU1 459 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 C1orf109Q9NX04 203 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ADAM21Q9UKJ8 722 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ICAM5Q9UMF0 924 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 RNF115Q9Y4L5 304 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 FBN3Q75N90 2809 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ROS1P08922 2347 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ZANQ9Y493 2812 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 TLN2Q9Y4G6 2542 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ANK3Q12955 4377 aaKnown RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 GXYLT2A0PJZ3 443 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 NPIPB9F8W1W9 429 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 H3BNH8 94 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 HAX1O00165 279 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 SCDO00767 359 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 DNPH1O43598 174 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 CXCL13O43927 109 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 SEC22BO75396 215 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 NME6O75414 186 aaPredicted RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 LYPLA1O75608 230 aaPredicted RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 URI1O94763 535 aaPredicted RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 IFNA2P01563 188 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 PROCP04070 461 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 CD3EP07766 207 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 YES1P07947 543 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ALOX5P09917 674 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 MYL2P10916 166 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 HPGDP15428 266 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 COX5AP20674 150 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 PAX7P23759 505 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 PCSK6P29122 969 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 OR3A2P47893 321 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC6A8P48029 635 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 CARD18P57730 90 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 C21orf58P58505 322 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 DSCR9P59020 149 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 DMTNQ08495 405 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF844Q08AG5 666 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 STX5Q13190 355 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 SELENBP1Q13228 472 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 TNK1Q13470 666 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 TAB1Q15750 504 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 DUSP5Q16690 384 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 CLEC12BQ2HXU8 276 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF672Q499Z4 452 aaPredicted RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 KLHL26Q53HC5 615 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ARL13AQ5H913 290 aaPredicted RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 TIMM23BQ5SRD1 257 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 HBMQ6B0K9 141 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 IFT20Q8IY31 132 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC16A11Q8NCK7 471 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 NUP43Q8NFH3 380 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 OR5M1Q8NGP8 315 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 B4GALNT2Q8NHY0 566 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 POC1BQ8TC44 478 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ZFP90Q8TF47 636 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 SMAP2Q8WU79 429 aaPredicted RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 PIK3R3Q92569 461 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 AKAP1Q92667 903 aaKnown RBP eCLIP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 OSTF1Q92882 214 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ARL8AQ96BM9 186 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 S100PBPQ96BU1 408 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 PPCDCQ96CD2 204 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ZC3HAV1LQ96H79 300 aaKnown RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 BOD1Q96IK1 185 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 EGLN2Q96KS0 407 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 RNF145Q96MT1 663 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 EBPLQ9BY08 206 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 REG4Q9BYZ8 158 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 TXLNGYQ9BZA5 131 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 TRIM2Q9C040 744 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 SLCO5A1Q9H2Y9 848 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 FBXO34Q9NWN3 711 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 KLHL9Q9P2J3 617 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ATP6V1HQ9UI12 483 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 MID2Q9UJV3 735 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 EMCNQ9ULC0 261 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 MGAT4BQ9UQ53 548 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 LAMP3Q9UQV4 416 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 VDAC3Q9Y277 283 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 POLR3HQ9Y535 204 aaPredicted RBP5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 PRR14LQ5THK1 2151 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 JMJD1CQ15652 2540 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 USF3Q68DE3 2245 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 ABCA1O95477 2261 aa5.43□□□□□ -1.54
LSM3P4-201ENST00000502948 IGKV3D-15A0A087WSY6 115 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 UQCRHLA0A096LP55 91 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ELOA3DA6NLF2 546 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 DUXAA6NLW8 204 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 TMEM114B3SHH9 223 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 TNFSF11O14788 317 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 AZIN1O14977 448 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 SMAD7O15105 426 aaKnown RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 LSM1O15116 133 aaKnown RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 EFNA2O43921 213 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 EIF4E2O60573 245 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms