RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 ELOVL7A1L3X0 281 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 LEUTXA8MZ59 168 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 ISM1B1AKI9 464 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 E9PQ18 207 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 H3BMH7 237 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 hCG_2039718K7EN88 272 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 ADAM10O14672 748 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 GSTA4O15217 222 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SLC16A5O15375 505 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 PHF1O43189 567 aaPredicted RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 KCNAB3O43448 404 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 HS6ST1O60243 411 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 OR1I1O60431 355 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 PRMT3O60678 531 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SMPD2O60906 423 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SLC43A1O75387 559 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SEMA3DO95025 777 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CLIC3O95833 236 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 IL1AP01583 271 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MT-ND2P03891 347 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 IL6P05231 212 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 HEXBP07686 556 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 PSKH1P11801 424 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 IGFBP2P18065 325 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 RAB3AP20336 220 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 ZP3P21754 424 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CD9P21926 228 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 ENPP1P22413 925 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MYL9P24844 172 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 HRH2P25021 359 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 ARNTP27540 789 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CCR7P32248 378 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 GBX2P52951 348 aaPredicted RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 EMP2P54851 167 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 DLX5P56178 289 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 NCS1P62166 190 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 BTG1P62324 171 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SRSF2Q01130 221 aaKnown RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 FLI1Q01543 452 aaPredicted RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 HSF2Q03933 536 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 TFF3Q07654 80 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MFSD13AQ14CX5 517 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MAD2L1BPQ15013 274 aaPredicted RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 OR1C1Q15619 314 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MEP1AQ16819 746 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 TIGD6Q17RP2 521 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CTU2Q2VPK5 515 aaKnown RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 TTLL9Q3SXZ7 439 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 UGT3A2Q3SY77 523 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 ATP6AP1LQ52LC2 224 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 RUNDC3AQ59EK9 446 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CATSPEREQ5SY80 951 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 LCN1P1Q5VSP4 162 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 GARNL3Q5VVW2 1013 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 TMEM236Q5W0B7 351 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 KDM4DQ6B0I6 523 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 ZNF585AQ6P3V2 769 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CYP20A1Q6UW02 462 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SPESP1Q6UW49 350 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 HSDL2Q6YN16 418 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 TMPRSS11AQ6ZMR5 421 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 Q6ZPB1 254 aaPredicted RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 NDUFAF7Q7L592 441 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 AMIGO1Q86WK6 493 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MCATQ8IVS2 390 aaKnown RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 BEST3Q8N1M1 668 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 UBE2J2Q8N2K1 259 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CADM2Q8N3J6 435 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 DTWD1Q8N5C7 304 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 C2orf73Q8N5S3 287 aaPredicted RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 MAPK1IP1LQ8NDC0 245 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 DUSP18Q8NEJ0 188 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 OR2T12Q8NG77 320 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 OR5AR1Q8NGP9 310 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 OR4L1Q8NH43 312 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 OR5K2Q8NHB8 316 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 LKAAEAR1Q8TD35 194 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 GTF2H4Q92759 462 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 UFD1Q92890 307 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SNAPC3Q92966 411 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MBD6Q96DN6 1003 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 HRASLS5Q96KN8 279 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SIGLEC12Q96PQ1 595 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 DCLRE1CQ96SD1 692 aaKnown RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 SPSB2Q99619 263 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 TREX2Q9BQ50 279 aaPredicted RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 UTP23Q9BRU9 249 aaKnown RBP4.78□□□□□ -1.64
HTT-202ENST00000502820 YIPF4Q9BSR8 244 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MED18Q9BUE0 208 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 MENTQ9BUN1 341 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CDADC1Q9BWV3 514 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SGPP1Q9BX95 441 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CDCA4Q9BXL8 241 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CHRNA10Q9GZZ6 450 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SPNS1Q9H2V7 528 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SERHL2Q9H4I8 314 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 IFT22Q9H7X7 185 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 AKTIPQ9H8T0 292 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 SMURF1Q9HCE7 757 aa4.78□□□□□ -1.64
HTT-202ENST00000502820 CHRAC1Q9NRG0 131 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms