RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CRLS1Q9UJA2 301 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 BARX2Q9UMQ3 279 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 RPH3ALQ9UNE2 315 aa4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 AHDC1Q5TGY3 1603 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 RGPD8O14715 1765 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P3-201ENST00000502802 NAIPQ13075 1403 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 RRBP1Q9P2E9 1410 aaKnown RBP4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 IFT172Q9UG01 1749 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 A0A1W2PNV4 684 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 TRABD2BA6NFA1 517 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZSCAN5BA6NJL1 495 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 FOXI3A8MTJ6 420 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 BTN3A3O00478 584 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 TPST2O60704 377 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 IGHV3-9P01782 118 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 HBQ1P09105 142 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 PGCP20142 388 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 RPL4P36578 427 aaKnown RBP4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 TAGLN2P37802 199 aaKnown RBP4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 GSK3BP49841 420 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 NOVA1P51513 510 aaKnown RBP4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 ARHGDIAP52565 204 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 BDH1Q02338 343 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 MAP2K1Q02750 393 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 RGS1Q08116 209 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 MESDQ14696 234 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 C10orf120Q5SQS8 335 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 DCST2Q5T1A1 773 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 C9orf66Q5T8R8 295 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 RFWD3Q6PCD5 774 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZNF613Q6PF04 617 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 STAC2Q6ZMT1 411 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 EFL1Q7Z2Z2 1120 aaKnown RBP4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 C16orf62Q7Z3J2 963 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 ACOT1Q86TX2 421 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 PHC2Q8IXK0 858 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 CLDN19Q8N6F1 224 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 M1APQ8TC57 530 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 C7orf34Q96L11 122 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 ZNF597Q96LX8 424 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 LINC00479Q96M42 142 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 AMDHD1Q96NU7 426 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 AGAP3Q96P47 875 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 TGM7Q96PF1 710 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 TMEM43Q9BTV4 400 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 GON7Q9BXV9 100 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 CTSZQ9UBR2 303 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 LCMT1Q9UIC8 334 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 MUTYHQ9UIF7 546 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 NAALAD2Q9Y3Q0 740 aa4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 TCF20Q9UGU0 1960 aaKnown RBP4.29□□□□□ -1.72
HMGB1P3-201ENST00000502802 LRP6O75581 1613 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 JCADQ9P266 1359 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 IGHV3OR16-12A0A075B7B8 117 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 RPL37AP8A6NKH3 93 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 PRRG1O14668 218 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 EFNA2O43921 213 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 B4GALT2O60909 372 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 TRIM3O75382 744 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 CAPN1P07384 714 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 PVRP15151 417 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 SDC1P18827 310 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 BDKRB1P46663 353 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 CEBPDP49716 269 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 PRELPP51888 382 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 ATP12AP54707 1039 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 NCBP1Q09161 790 aaKnown RBP4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 ELAVL2Q12926 359 aaKnown RBP4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 HNRNPA0Q13151 305 aaKnown RBP4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 C17orf58Q2M2W7 97 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 CNPY1Q3B7I2 92 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 GGTA1PQ4G0N0 100 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 VWA2Q5GFL6 755 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 ERICH1Q86X53 443 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 LRRC49Q8IUZ0 686 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 VSTM4Q8IW00 320 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 SLC38A6Q8IZM9 456 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 BPIFB2Q8N4F0 458 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 C4orf32Q8N8J7 132 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 RFESDQ8TAC1 157 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 PIGCQ92535 297 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 JPT2Q9H910 190 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 RAB18Q9NP72 206 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 RCOR3Q9P2K3 495 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 MRPL11Q9Y3B7 192 aaKnown RBP4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 MAD1L1Q9Y6D9 718 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 MARF1Q9Y4F3 1742 aaKnown RBP4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 LAMC1P11047 1609 aa4.28□□□□□ -1.72
HMGB1P3-201ENST00000502802 ASXL1Q8IXJ9 1541 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 TRAV26-1A0A087WT03 109 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 IGHV3-16A0A0C4DH30 117 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 PCP4L1A6NKN8 68 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 NPIPA7E9PJI5 369 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZG16O60844 167 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 IGKV3-20P01619 116 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 NPIPA8P0DM63 369 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 IGFBP5P24593 272 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 ATP5A1P25705 553 aaKnown RBP4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 LAP3P28838 519 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 HPCAL1P37235 193 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms