RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 FEZF1A0PJY2 475 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 ZAR1LA6NP61 321 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 FOXE1O00358 373 aaPredicted RBP16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 S1PR1P21453 382 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 NKX3-2P78367 333 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 MEX3DQ86XN8 651 aaKnown RBP16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 KIAA1958Q8N8K9 716 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 SYNPRQ8TBG9 265 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 TREX2Q9BQ50 279 aaPredicted RBP16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 SYNPO2LQ9H987 977 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 TEX13DA0A0J9YY54 714 aaPredicted RBP16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 CPEP16870 476 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 S100A11P31949 105 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 HENMT1Q5T8I9 393 aaKnown RBP16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 OR52N1Q8NH53 320 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 OR5AK2Q8NH90 309 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 PKMYT1Q99640 499 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 NKX2-4Q9H2Z4 354 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 DHDHQ9UQ10 334 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 V9GY05 133 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 LAMB2P55268 1798 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 A8MVJ9 347 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 LEFTY2O00292 366 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 SDC3O75056 442 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 SCGB1D2O95969 90 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 RAB3AP20336 220 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 IL12BP29460 328 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 RBMXP38159 391 aaKnown RBP16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 CAPZA1P52907 286 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 CCINQ13939 588 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 UBE2NLQ5JXB2 153 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 COX20Q5RI15 118 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 KIAA1211LQ6NV74 962 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 SLC35F2Q8IXU6 374 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 OR2AJ1Q8NGZ0 328 aa16.18■□□□□ 0.18
HMGXB3-201ENST00000502717 IGLV3-10A0A075B6K4 115 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 A0A0D9SG52 128 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 ZNF878C9JN71 531 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 M0R082 166 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 SULT1C2O00338 296 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 LCMT2O60294 686 aaKnown RBP16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 PRSS23O95084 383 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 OR4M1Q8NGD0 313 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 PHB2Q99623 299 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 CAMK2AQ9UQM7 478 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 GPR50Q13585 617 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 PIP5KL1Q5T9C9 394 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 ZNF546Q86UE3 836 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 SERPINA12Q8IW75 414 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 SLC6A7Q99884 636 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 P2RY12Q9H244 342 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 RAB3DO95716 219 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 WDPCPO95876 746 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 ATP5A1P25705 553 aaKnown RBP16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 SYPL1Q16563 259 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 DUSP6Q16828 381 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 PRSS36Q5K4E3 855 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 GRAMD2AQ8IUY3 354 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 C12orf45Q8N5I9 185 aaPredicted RBP16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 CYB561A3Q8NBI2 242 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 CHTF18Q8WVB6 975 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 OR52D1Q9H346 318 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 SDHAF2Q9NX18 166 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 A0A1B0GTL3 188 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 EDDM13A0A1B0GTR0 161 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 FRS3O43559 492 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 PPP1R3DO95685 299 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 HMGN2P05204 90 aaKnown RBP16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 SHC1P29353 583 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 FAM26EQ8N5C1 309 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 FIBINQ8TAL6 211 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 SCARB1Q8WTV0 552 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 ST8SIA4Q92187 359 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 ASB1Q9Y576 335 aa16.17■□□□□ 0.18
HMGXB3-201ENST00000502717 FAM183AA6NL82 134 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 FAM227AF5H4B4 570 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 GJA1P17302 382 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 GABRA3P34903 492 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 CSNK1DP48730 415 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 HTR4Q13639 388 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 KRBOX4Q5JUW0 171 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 C8orf82Q6P1X6 216 aaPredicted RBP16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 LCTLQ6UWM7 567 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 PGAP1Q75T13 922 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 BCDIN3DQ7Z5W3 292 aaKnown RBP16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 TMEM41AQ96HV5 264 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 UQCC2Q9BRT2 126 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 SCGNO76038 276 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 VNN2O95498 520 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 ZNF8P17098 575 aaPredicted RBP16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 NRG3P56975 720 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 ZBTB37Q5TC79 503 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 NEK7Q8TDX7 302 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 TMEM239Q8WW34 195 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 RBM7Q9Y580 266 aaKnown RBP16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 SLC9B1P1A6NJY1 282 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 FURINP09958 794 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 CERS1P27544 350 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 VAMP2P63027 116 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 ENPP7Q6UWV6 458 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms