RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 SPATA7Q9P0W8 599 aa2.73□□□□□ -1.97
SCLT1-203ENST00000502495 SLC12A6Q9UHW9 1150 aa2.73□□□□□ -1.97
SCLT1-203ENST00000502495 B9D1Q9UPM9 204 aa2.73□□□□□ -1.97
SCLT1-203ENST00000502495 SLCO1B1Q9Y6L6 691 aa2.73□□□□□ -1.97
SCLT1-203ENST00000502495 COMMD3-BMI1R4GMX3 469 aa2.73□□□□□ -1.97
SCLT1-203ENST00000502495 PTPRDP23468 1912 aa2.73□□□□□ -1.97
SCLT1-203ENST00000502495 MYO9BQ13459 2157 aa2.73□□□□□ -1.97
SCLT1-203ENST00000502495 SAA2-SAA4A0A096LPE2 208 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 A0A1B0GTQ1 180 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ZNF840PA6NDX5 716 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 LILRA5A6NI73 299 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ACOD1A6NK06 481 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 WASH3PC4AMC7 463 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PPIAL4DF5H284 164 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SPECC1L-ADORA2AF8WAN1 911 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 NDUFS8O00217 210 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SDHDO14521 159 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ZNF197O14709 1029 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TNRC18O15417 2968 aaPredicted RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 E2F6O75461 281 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 GRAP2O75791 330 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TM7SF2O76062 418 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 OTCP00480 354 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 IGLV3-25P01717 112 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 FGGP02679 453 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 RAF1P04049 648 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 CAPN1P07384 714 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PABPC4LP0CB38 370 aaKnown RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PLA2G2AP14555 144 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 HMGA1P17096 107 aaKnown RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ITGA2P17301 1181 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ATF6P18850 670 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 FCARP24071 287 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 MIPP30301 263 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TRIM23P36406 574 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ATP5C1P36542 298 aaKnown RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 NUP62P37198 522 aaPredicted RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 MNDAP41218 407 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 GLIPR1P48060 266 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 THOP1P52888 689 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ART1P52961 327 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 RPP38P78345 283 aaKnown RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 OGDHQ02218 1023 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SLC25A11Q02978 314 aaKnown RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ZNF415Q09FC8 603 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TAF10Q12962 218 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 NME3Q13232 169 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 IL18Q14116 193 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TATDN3Q17R31 274 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 UGT3A2Q3SY77 523 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PDLIM3Q53GG5 364 aaPredicted RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ARMCX4Q5H9R4 360 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SEL1L2Q5TEA6 688 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PRAMEF5Q5TYX0 476 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PRAMEF6Q5VXH4 476 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SYPL2Q5VXT5 272 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 CARD17Q5XLA6 110 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 NADSYN1Q6IA69 706 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TRNP1Q6NT89 227 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TTC27Q6P3X3 843 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TMEM184AQ6ZMB5 413 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 Q75L30 129 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 BZW1Q7L1Q6 419 aaKnown RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SCD5Q86SK9 330 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SATL1Q86VE3 508 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TMEM219Q86XT9 240 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 LRRC49Q8IUZ0 686 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 MMD2Q8IY49 270 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 NPEPL1Q8NDH3 523 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SPATA4Q8NEY3 305 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 OR52I2Q8NH67 350 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 JOSD2Q8TAC2 188 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 RNF128Q8TEB7 428 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 GIPC3Q8TF64 312 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 FAM172AQ8WUF8 416 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 TMEM45BQ96B21 275 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 FAF2Q96CS3 445 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ATP6V1G3Q96LB4 118 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 NPAS2Q99743 824 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 CITED1Q99966 193 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ZNF670Q9BS34 389 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PRO3102Q9H379 93 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 SUDS3Q9H7L9 328 aaPredicted RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 UBTD1Q9HAC8 227 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 MEAF6Q9HAF1 191 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ACKR4Q9NPB9 350 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 DDX28Q9NUL7 540 aaKnown RBP2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PTTG2Q9NZH5 202 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 KLHL9Q9P2J3 617 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 BCAP29Q9UHQ4 241 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 ERVK-19Q9WJR5 959 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 STK38LQ9Y2H1 464 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 OR2W1Q9Y3N9 320 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 OR10H1Q9Y4A9 318 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 YIPF1Q9Y548 306 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 MYO7AQ13402 2215 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 NLRC5Q86WI3 1866 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 CDH23Q9H251 3354 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 PTPRSQ13332 1948 aa2.72□□□□□ -1.97
SCLT1-203ENST00000502495 LOC100653049A0A140TA62 436 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms