RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 HSD17B8Q92506 261 aa14.26□□□□□ -0.13
MUC1-220ENST00000498431 CIDECQ96AQ7 238 aaPredicted RBP14.26□□□□□ -0.13
MUC1-220ENST00000498431 L3HYPDHQ96EM0 354 aa14.26□□□□□ -0.13
MUC1-220ENST00000498431 GIMAP5Q96F15 307 aa14.26□□□□□ -0.13
MUC1-220ENST00000498431 OTUB1Q96FW1 271 aaPredicted RBP14.26□□□□□ -0.13
MUC1-220ENST00000498431 GSTO2Q9H4Y5 243 aa14.26□□□□□ -0.13
MUC1-220ENST00000498431 KLHL13Q9P2N7 655 aa14.26□□□□□ -0.13
MUC1-220ENST00000498431 TTC36A6NLP5 189 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 ZNF814B7Z6K7 855 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 KCNK2O95069 426 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 SNRPAP09012 282 aaKnown RBP14.25□□□□□ -0.13
MUC1-220ENST00000498431 LINGO3P0C6S8 592 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 PRPS2P11908 318 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 EDNRAP25101 427 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 GCAP28676 217 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 RNF144AP50876 292 aaPredicted RBP14.25□□□□□ -0.13
MUC1-220ENST00000498431 PRKAG1P54619 331 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 PRKAA2P54646 552 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 C21orf58P58505 322 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 FOXF1Q12946 379 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 ZNF385BQ569K4 471 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 PDSS1Q5T2R2 415 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 C6orf52Q5T4I8 152 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 CCNJQ5T5M9 372 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 GTF2IRD2BQ6EKJ0 949 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 NOXRED1Q6NXP6 359 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 TRMT10CQ7L0Y3 403 aaKnown RBP14.25□□□□□ -0.13
MUC1-220ENST00000498431 GTF2IRD2Q86UP8 949 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 SLC16A11Q8NCK7 471 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 KISS1RQ969F8 398 aaPredicted RBP14.25□□□□□ -0.13
MUC1-220ENST00000498431 HS6ST2Q96MM7 605 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 LRTM1Q9HBL6 345 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 TNFRSF12AQ9NP84 129 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 MID1IP1Q9NPA3 183 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 NGBQ9NPG2 151 aa14.25□□□□□ -0.13
MUC1-220ENST00000498431 YLPM1P49750 1951 aaKnown RBP14.24□□□□□ -0.13
MUC1-220ENST00000498431 SHISA9B4DS77 424 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 PDPK1O15530 556 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 OIP5O43482 229 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 SSX4O60224 188 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 IFI6P09912 130 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 GPC1P35052 558 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 MANFP55145 182 aaKnown RBP14.24□□□□□ -0.13
MUC1-220ENST00000498431 DUSP5Q16690 384 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 IMPG1Q17R60 797 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 DTX2Q86UW9 622 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 CDRT4Q8N9R6 151 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 B4GALNT2Q8NHY0 566 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 ZNF524Q96C55 264 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 C16orf58Q96GQ5 468 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 REXO5Q96IC2 774 aaKnown RBP14.24□□□□□ -0.13
MUC1-220ENST00000498431 POTEKPQ9BYX7 375 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 TXLNGYQ9BZA5 131 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 COQ10BQ9H8M1 238 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 CISD1Q9NZ45 108 aaKnown RBP14.24□□□□□ -0.13
MUC1-220ENST00000498431 B3GALT5Q9Y2C3 310 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 STK38LQ9Y2H1 464 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 SNX8Q9Y5X2 465 aa14.24□□□□□ -0.13
MUC1-220ENST00000498431 IGHV3-15A0A0B4J1V0 119 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 CCDC151A5D8V7 595 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 LYZL6O75951 148 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 PABPC4LP0CB38 370 aaKnown RBP14.23□□□□□ -0.13
MUC1-220ENST00000498431 FAM157CP0CG43 387 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 CDH11P55287 796 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 ZNF117Q03924 483 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 ITGADQ13349 1161 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 RNPS1Q15287 305 aaKnown RBP14.23□□□□□ -0.13
MUC1-220ENST00000498431 VPS26BQ4G0F5 336 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 EMBQ6PCB8 327 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 TIFABQ6ZNK6 161 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 IKBIPQ70UQ0 350 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 FCRLAQ7L513 359 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 BHLHA15Q7RTS1 189 aaPredicted RBP14.23□□□□□ -0.13
MUC1-220ENST00000498431 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.23□□□□□ -0.13
MUC1-220ENST00000498431 SZRD1Q7Z422 152 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 TRIM46Q7Z4K8 759 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 SLC22A9Q8IVM8 553 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 CCNYL1Q8N7R7 359 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 NUP43Q8NFH3 380 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 AENQ8WTP8 325 aaKnown RBP14.23□□□□□ -0.13
MUC1-220ENST00000498431 CPNE4Q96A23 557 aaPredicted RBP14.23□□□□□ -0.13
MUC1-220ENST00000498431 ALG2Q9H553 416 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 CXorf36Q9H7Y0 433 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 BARX1Q9HBU1 254 aaPredicted RBP14.23□□□□□ -0.13
MUC1-220ENST00000498431 UBQLN4Q9NRR5 601 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 NPAP1Q9NZP6 1156 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 NTMQ9P121 344 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 PRSS50Q9UI38 385 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 ING1Q9UK53 422 aaPredicted RBP14.23□□□□□ -0.13
MUC1-220ENST00000498431 CCL27Q9Y4X3 112 aa14.23□□□□□ -0.13
MUC1-220ENST00000498431 GOLGA8RI6L899 631 aa14.22□□□□□ -0.13
MUC1-220ENST00000498431 RSL1D1O76021 490 aaKnown RBP14.22□□□□□ -0.13
MUC1-220ENST00000498431 PRKD3O94806 890 aa14.22□□□□□ -0.13
MUC1-220ENST00000498431 F12P00748 615 aaPredicted RBP14.22□□□□□ -0.13
MUC1-220ENST00000498431 YES1P07947 543 aa14.22□□□□□ -0.13
MUC1-220ENST00000498431 EFNA1P20827 205 aaPredicted RBP14.22□□□□□ -0.13
MUC1-220ENST00000498431 ENPP1P22413 925 aa14.22□□□□□ -0.13
MUC1-220ENST00000498431 ELK4P28324 431 aa14.22□□□□□ -0.13
MUC1-220ENST00000498431 IRX1P78414 480 aaPredicted RBP14.22□□□□□ -0.13
MUC1-220ENST00000498431 KIAA0040Q15053 153 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms