RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 DLGAP1O14490 977 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ANGPT2O15123 496 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ARHGEF9O43307 516 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CDK14O94921 469 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 RETP07949 1114 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 SERPINF2P08697 491 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 NR2F1P10589 423 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 UROSP10746 265 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 GFAPP14136 432 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CEBPBP17676 345 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 RPS3P23396 243 aaKnown RBP eCLIP4.23□□□□□ -1.731e-14■■□□□ 12.7
SSR3-209ENST00000498205 JAK1P23458 1154 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 GABRA5P31644 462 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 EPHX2P34913 555 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CAPGP40121 348 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 TTPAP49638 278 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 BMXP51813 675 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ZNF140P52738 457 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 CXCR4P61073 352 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CDKL1Q00532 357 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 EMX2Q04743 252 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 MERTKQ12866 999 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 POU6F1Q14863 301 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 TAF1AQ15573 450 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 CCL15Q16663 113 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ZNF829Q3KNS6 432 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 ZFP69Q49AA0 526 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 AGKQ53H12 422 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 UNC50Q53HI1 259 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 DCAF10Q5QP82 559 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ELFN2Q5R3F8 820 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 PPM1LQ5SGD2 360 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 GARNL3Q5VVW2 1013 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 TTC23Q5W5X9 447 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 UGT3A1Q6NUS8 523 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 AFTPHQ6ULP2 937 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CES3Q6UWW8 571 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ABRAXAS1Q6UWZ7 409 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CD300LGQ6UXG3 332 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CERS6Q6ZMG9 384 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 SCD5Q86SK9 330 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ADAMTSL2Q86TH1 951 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 EGFL6Q8IUX8 553 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 SVOPLQ8N434 492 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 TRIML2Q8N7C3 387 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CCNYL1Q8N7R7 359 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 AVL9Q8NBF6 648 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 MINDY2Q8NBR6 621 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 IPMKQ8NFU5 416 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 FNDC8Q8TC99 324 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 UBTD2Q8WUN7 234 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ISG20Q96AZ6 181 aaKnown RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 LRRC58Q96CX6 371 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 NRBF2Q96F24 287 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 AURKBQ96GD4 344 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 GMPPAQ96IJ6 420 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 OLFM1Q99784 485 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 OPRPNQ99935 248 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 SH3GL1Q99961 368 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 DDX50Q9BQ39 737 aaKnown RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 WDR13Q9H1Z4 485 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CXCL16Q9H2A7 254 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 CWH43Q9H720 699 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 COQ10BQ9H8M1 238 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 GPN2Q9H9Y4 310 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 PDFQ9HBH1 243 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 PLGRKTQ9HBL7 147 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ANKHQ9HCJ1 492 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ZNF71Q9NQZ8 489 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 AIG1Q9NVV5 245 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 NLE1Q9NVX2 485 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 SMPD3Q9NY59 655 aaPredicted RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 TAS2R13Q9NYV9 303 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 USE1Q9NZ43 259 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ADA2Q9NZK5 511 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 BLOC1S6Q9UL45 172 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 PCDHGB4Q9UN71 923 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ERVW-1Q9UQF0 538 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 NAALAD2Q9Y3Q0 740 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 TRIM17Q9Y577 477 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 NYNRINQ9P2P1 1898 aaKnown RBP4.23□□□□□ -1.73
SSR3-209ENST00000498205 KIAA1671Q9BY89 1806 aa4.23□□□□□ -1.73
SSR3-209ENST00000498205 ILVBLA1L0T0 632 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 M0QX08 132 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 DFFAO00273 331 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 NME4O00746 187 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 TXNDC9O14530 226 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 UBFD1O14562 309 aaKnown RBP4.22□□□□□ -1.73
SSR3-209ENST00000498205 ARPC2O15144 300 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 ACOX3O15254 700 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 HCRTO43612 131 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 GJB3O75712 270 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 DFFBO76075 338 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 PGM3O95394 542 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 BCL10O95999 233 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 ABCB1P08183 1280 aaPredicted RBP4.22□□□□□ -1.73
SSR3-209ENST00000498205 CCDC159P0C7I6 412 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 DANCRP0C864 163 aa4.22□□□□□ -1.73
SSR3-209ENST00000498205 HMOX2P30519 316 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms