RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 CCDC124Q96CT7 223 aaKnown RBP18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 PYURFQ96I23 114 aa18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 ARHGDIGQ99819 225 aa18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 QRSL1Q9H0R6 528 aaKnown RBP18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 PTGES2Q9H7Z7 377 aa18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 ZFP64Q9NPA5 681 aa18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 ANKRD10Q9NXR5 420 aa18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 DNAJB12Q9NXW2 375 aaKnown RBP18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 TP53TG5Q9Y2B4 290 aa18.02■□□□□ 0.48
SCAMP3-209ENST00000497470 TNRC6AQ8NDV7 1962 aaKnown RBP18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 NPIPA5A0A0B4J1W7 369 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 CENPVL1A0A0U1RR11 272 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 TCRBV5S2A0A599 114 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 NPIPA7E9PJI5 369 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 PDGFAP04085 211 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 NPIPA8P0DM63 369 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 UQCRBP14927 111 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 NCK1P16333 377 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 MSX2P35548 267 aaPredicted RBP18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 ACTR3P61158 418 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 OLIG3Q7RTU3 272 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 SULF2Q8IWU5 870 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 LSMEM1Q8N8F7 131 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 WDSUB1Q8N9V3 476 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 OR1J4Q8NGS1 313 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 B4GALNT2Q8NHY0 566 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 GEMIN6Q8WXD5 167 aaKnown RBP18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 RSPO3Q9BXY4 272 aaPredicted RBP18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 SLC25A18Q9H1K4 315 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 PPP4R1LQ9P1A2 415 aa18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 TESQ9UGI8 421 aaKnown RBP18.01■□□□□ 0.47
SCAMP3-209ENST00000497470 C7orf72A4D263 438 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 ANKUB1A6NFN9 424 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 GLSO94925 669 aaPredicted RBP18■□□□□ 0.47
SCAMP3-209ENST00000497470 EPPINO95925 133 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 ATP6V1B2P21281 511 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 ADH6P28332 368 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 MAP2K6P52564 334 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 IFI44LQ53G44 452 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 C1orf146Q5VVC0 180 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 PIWIL3Q7Z3Z3 882 aaKnown RBP18■□□□□ 0.47
SCAMP3-209ENST00000497470 GALNTL5Q7Z4T8 443 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 SPPL2CQ8IUH8 684 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 CLIP4Q8N3C7 705 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 ZNF614Q8N883 585 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 CATSPER1Q8NEC5 780 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 RTN4RQ9BZR6 473 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 UBQLN3Q9H347 655 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 DEPPQ9NTK1 212 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 B4GALT7Q9UBV7 327 aa18■□□□□ 0.47
SCAMP3-209ENST00000497470 LINC01387J3KSC0 135 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 SCO2O43819 266 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 TPST1O60507 370 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 SORBS2O94875 1100 aaKnown RBP17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 SEMG1P04279 462 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 FAM87AP0C7U9 286 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 ITGA2P17301 1181 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 PGCP20142 388 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 MASP1P48740 699 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 DSCR4P56555 118 aaPredicted RBP17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 PLAURQ03405 335 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 ZNF117Q03924 483 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 EPS8Q12929 822 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 CBFBQ13951 182 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 SLC25A53Q5H9E4 307 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 PRAMEF20Q5VT98 475 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 SMYD1Q8NB12 490 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 PAPD5Q8NDF8 572 aaKnown RBP17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 OR2M3Q8NG83 312 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 ST8SIA1Q92185 356 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 CNOT9Q92600 299 aaKnown RBP17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 C12orf10Q9HB07 376 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 GALNT9Q9HCQ5 603 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 IL1RAPQ9NPH3 570 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 CELSR3Q9NYQ7 3312 aa17.99■□□□□ 0.47
SCAMP3-209ENST00000497470 MAP1BP46821 2468 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 HCRTR2O43614 444 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 PRKD3O94806 890 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 OPN1SWP03999 348 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 THRBP10828 461 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 FKBP2P26885 142 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 SRD5A2P31213 254 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 EIF1P41567 113 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 ACAA2P42765 397 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 MAGEA2P43356 314 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 CD97P48960 835 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 ZNF136P52737 540 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 GK3PQ14409 553 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 FAM98BQ52LJ0 330 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 SWT1Q5T5J6 900 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 BICRALQ6AI39 1079 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 RANBP3LQ86VV4 465 aaPredicted RBP17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 SLC22A16Q86VW1 577 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 EXD3Q8N9H8 876 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 TMEM234Q8WY98 164 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 CRELD1Q96HD1 420 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 ZNF559Q9BR84 538 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 TRIM2Q9C040 744 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 YY1AP1Q9H869 796 aa17.98■□□□□ 0.47
SCAMP3-209ENST00000497470 ACKR4Q9NPB9 350 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms