RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RIT2Q99578 217 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 SLC6A7Q99884 636 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 CRACR2AQ9BSW2 395 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 ELOVL3Q9HB03 270 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 EXTL2Q9UBQ6 330 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 NPIPA1Q9UND3 350 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 RPH3ALQ9UNE2 315 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 MRPS33Q9Y291 106 aaKnown RBP3.06□□□□□ -1.92
SMC4-225ENST00000497203 MAB21L2Q9Y586 359 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 ALG6Q9Y672 507 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 MSH4O15457 936 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 NUDT21O43809 227 aaKnown RBP3.05□□□□□ -1.92
SMC4-225ENST00000497203 SPAG6O75602 509 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 UGT2B17O75795 530 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 CABYRO75952 493 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 THY1P04216 161 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 IQCF3P0C7M6 154 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 CPN1P15169 458 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 GCFC2P16383 781 aaKnown RBP3.05□□□□□ -1.92
SMC4-225ENST00000497203 GLRA2P23416 452 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 PAX7P23759 505 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 HNMTP50135 292 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 GBX2P52951 348 aaPredicted RBP3.05□□□□□ -1.92
SMC4-225ENST00000497203 CXCL6P80162 114 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 EWSR1Q01844 656 aaKnown RBP eCLIP3.05□□□□□ -1.92
SMC4-225ENST00000497203 RAB40BQ12829 278 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 DPYSL3Q14195 570 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 LAGE3Q14657 143 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 SYPL1Q16563 259 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 ZNF239Q16600 458 aaKnown RBP3.05□□□□□ -1.92
SMC4-225ENST00000497203 PAN3Q58A45 887 aaKnown RBP3.05□□□□□ -1.92
SMC4-225ENST00000497203 FAM120AOSQ5T036 256 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 TTC23Q5W5X9 447 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 OR5M10Q6IEU7 315 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 UFSP1Q6NVU6 142 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 FAM71F2Q6NXP2 309 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 C16orf62Q7Z3J2 963 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 KIAA1328Q86T90 577 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 ZNF683Q8IZ20 524 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 GPD1LQ8N335 351 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 DHRSXQ8N5I4 330 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 ANKFN1Q8N957 763 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 KLHL30-AS1Q8NEE0 82 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 STEAP2Q8NFT2 490 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 STXBP6Q8NFX7 210 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 TYMSOSQ8TAI1 123 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 SH3YL1Q96HL8 342 aaPredicted RBP3.05□□□□□ -1.92
SMC4-225ENST00000497203 C12orf66Q96MD2 445 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 TUBGCP2Q9BSJ2 902 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 ZSCAN5AQ9BUG6 496 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 TSSK1BQ9BXA7 367 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 TEX13BQ9BXU2 312 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 MEAF6Q9HAF1 191 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 MIEF1Q9NQG6 463 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 NANSQ9NR45 359 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 ABCD2Q9UBJ2 740 aa3.05□□□□□ -1.92
SMC4-225ENST00000497203 FRMPD4Q14CM0 1322 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 TP53BP1Q12888 1972 aaPredicted RBP3.04□□□□□ -1.92
SMC4-225ENST00000497203 CFAP65Q6ZU64 1925 aaKnown RBP3.04□□□□□ -1.92
SMC4-225ENST00000497203 IGHV3-35A0A0C4DH35 117 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 CLRN2A0PK11 232 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 DHRS7CA6NNS2 312 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 OR7A17O14581 309 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 EFNA2O43921 213 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 N4BP1O75113 896 aaKnown RBP3.04□□□□□ -1.92
SMC4-225ENST00000497203 LRATO95237 230 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 PGK1P00558 417 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 F10P00742 488 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 CALB2P22676 271 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 GDF1P27539 372 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 NMT1P30419 496 aaKnown RBP3.04□□□□□ -1.92
SMC4-225ENST00000497203 PRKAR2BP31323 418 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 MDH2P40926 338 aaKnown RBP3.04□□□□□ -1.92
SMC4-225ENST00000497203 ERVPABLB-1P60509 514 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 GPM6BQ13491 265 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 GANABQ14697 944 aaKnown RBP3.04□□□□□ -1.92
SMC4-225ENST00000497203 GSG1Q2KHT4 349 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 CCDC152Q4G0S7 254 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 PYHIN1Q6K0P9 492 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 CGB2Q6NT52 195 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 ZNF774Q6NX45 483 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 VITQ6UXI7 678 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 RGS9BPQ6ZS82 235 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 MOB3BQ86TA1 216 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 LRRC43Q8N309 656 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 OR2T33Q8NG76 320 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 OR52M1Q8NGK5 317 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 OR2T3Q8NH03 318 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 FAM3CQ92520 227 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 PAXXQ9BUH6 204 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 WRAP73Q9P2S5 460 aaPredicted RBP3.04□□□□□ -1.92
SMC4-225ENST00000497203 SPRR3Q9UBC9 169 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 ZNF107Q9UII5 783 aaPredicted RBP3.04□□□□□ -1.92
SMC4-225ENST00000497203 ZNF221Q9UK13 617 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 FLVCR1Q9Y5Y0 555 aa3.04□□□□□ -1.92
SMC4-225ENST00000497203 ATAD2BQ9ULI0 1458 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.03□□□□□ -1.92
SMC4-225ENST00000497203 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.03□□□□□ -1.92
SMC4-225ENST00000497203 H3BMQ9 156 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 BTN3A3O00478 584 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms