RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PGAM4Q8N0Y7 254 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 TMCO5AQ8N6Q1 288 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 BHLHE22Q8NFJ8 381 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-235ENST00000495515 OR2T12Q8NG77 320 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 C1GALT1C1Q96EU7 318 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 OR2B2Q9GZK3 357 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 LAT2Q9GZY6 243 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 PIF1Q9H611 641 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 PLSCR2Q9NRY7 297 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 CMTM6Q9NX76 183 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 TAS2R10Q9NYW0 307 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 CARD8Q9Y2G2 431 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 CENPVL1A0A0U1RR11 272 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 ANKUB1A6NFN9 424 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 CYP7B1O75881 506 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 NUDT14O95848 222 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 CELA3AP09093 270 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 UBTFL6P0CB48 400 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-235ENST00000495515 GZMMP51124 257 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 EEFSECP57772 596 aaKnown RBP15.55■□□□□ 0.08
HDAC6-235ENST00000495515 FOXK1P85037 733 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF117Q03924 483 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 LIPEQ05469 1076 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 CBFBQ13951 182 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 VEZF1Q14119 521 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.55■□□□□ 0.08
HDAC6-235ENST00000495515 GLYR1Q49A26 553 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF311Q5JNZ3 666 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 TRILQ7L0X0 811 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF440Q8IYI8 595 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 FAM83FQ8NEG4 500 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-235ENST00000495515 TNIP2Q8NFZ5 429 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 OR5W2Q8NH69 310 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF583Q96ND8 569 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 EXOSC3Q9NQT5 275 aaKnown RBP15.55■□□□□ 0.08
HDAC6-235ENST00000495515 ADA2Q9NZK5 511 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 GPC6Q9Y625 555 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-235ENST00000495515 KALRNO60229 2985 aa15.55■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF462Q96JM2 2506 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 A0A1B0GVC2 190 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 ELOVL7A1L3X0 281 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 OR14I1A6ND48 311 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 CCT8L1PA6NM43 557 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 C17orf51A8MQB3 221 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 B2RBV5 119 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 AQP7O14520 342 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 GMFGO60234 142 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 PABPC4LP0CB38 370 aaKnown RBP15.54■□□□□ 0.08
HDAC6-235ENST00000495515 UQCRBP14927 111 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 HK1P19367 917 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 AQP1P29972 269 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 PRKAR1BP31321 381 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 PGM1P36871 562 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 SLC6A8P48029 635 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 RNF144AP50876 292 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-235ENST00000495515 CCR4P51679 360 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 IGFBP7Q16270 282 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 EIPR1Q53HC9 387 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 WIPI1Q5MNZ9 446 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-235ENST00000495515 RNF220Q5VTB9 566 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 AAGABQ6PD74 315 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 HMGN2P46Q86SG4 172 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 YRDCQ86U90 279 aaKnown RBP15.54■□□□□ 0.08
HDAC6-235ENST00000495515 IFNEQ86WN2 208 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 VRK2Q86Y07 508 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 NEIL3Q8TAT5 605 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 ZBTB8AQ96BR9 441 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 SARAFQ96BY9 339 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 SLC6A15Q9H2J7 730 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 ALG2Q9H553 416 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 ABCD2Q9UBJ2 740 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 SLC13A4Q9UKG4 626 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 PRDM4Q9UKN5 801 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 ICAM5Q9UMF0 924 aa15.54■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF443Q9Y2A4 671 aaPredicted RBP15.54■□□□□ 0.08
HDAC6-235ENST00000495515 A0A1B0GTH9 108 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 LINC01387J3KSC0 135 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 NME4O00746 187 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 IFNA14P01570 189 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 ABOP16442 354 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 PGCP20142 388 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 PTGS2P35354 604 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 EIF1P41567 113 aaKnown RBP15.53■□□□□ 0.08
HDAC6-235ENST00000495515 PCBP3P57721 371 aaKnown RBP15.53■□□□□ 0.08
HDAC6-235ENST00000495515 SLC25A3Q00325 362 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 SKP2Q13309 424 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 MRPL2Q5T653 305 aaKnown RBP15.53■□□□□ 0.08
HDAC6-235ENST00000495515 CBLN3Q6UW01 205 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 ARMC8Q8IUR7 673 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 MICU2Q8IYU8 434 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 FAM71CQ8NEG0 241 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 SLC26A7Q8TE54 656 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 RASSF5Q8WWW0 418 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 ARSGQ96EG1 525 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 SFXN2Q96NB2 322 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 PIGQQ9BRB3 760 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 KLHL28Q9NXS3 571 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 TMEM181Q9P2C4 612 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 HRH3Q9Y5N1 445 aa15.53■□□□□ 0.08
HDAC6-235ENST00000495515 HELZ2Q9BYK8 2649 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms