RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 HNRNPCL3B7ZW38 293 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 PRRG2O14669 202 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF264O43296 627 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 HNRNPCL1O60812 293 aaKnown RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 UBTFL6P0CB48 400 aaPredicted RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 HNRNPCL4P0DMR1 293 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 RPS4Y1P22090 263 aaKnown RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 PGM1P36871 562 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 CA7P43166 264 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 P2RX1P51575 399 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 CCR4P51679 360 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 GFRA1P56159 465 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 B3GALT5-AS1P59052 145 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 KCNJ10P78508 379 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 CDK6Q00534 326 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 SKP2Q13309 424 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 SCARB2Q14108 478 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 GNA13Q14344 377 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 TOMM34Q15785 309 aaPredicted RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 CYP51A1Q16850 503 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 GKAP1Q5VSY0 366 aaPredicted RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 RAET1LQ5VY80 246 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF585AQ6P3V2 769 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 NCCRP1Q6ZVX7 275 aaPredicted RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 EIF3MQ7L2H7 374 aaKnown RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 ANKS4BQ8N8V4 417 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 OR52P1PQ8NH57 321 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 WDR60Q8WVS4 1066 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 SFXN2Q96NB2 322 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 TIMP4Q99727 224 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 TMEM38AQ9H6F2 299 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 MED17Q9NVC6 651 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 ALKBH4Q9NXW9 302 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 SUCOQ9UBS9 1254 aaKnown RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 ERRFI1Q9UJM3 462 aaPredicted RBP17.61■□□□□ 0.41
HDAC4-212ENST00000495497 DSPPQ9NZW4 1301 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF407Q9C0G0 2248 aa17.61■□□□□ 0.41
HDAC4-212ENST00000495497 OR14I1A6ND48 311 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 BCKDKO14874 412 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 EIF4E2O60573 245 aaKnown RBP17.6■□□□□ 0.41
HDAC4-212ENST00000495497 DCTN3O75935 186 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 PGM3O95394 542 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 NUDT14O95848 222 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 NPPAP01160 153 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 DBIP07108 87 aaKnown RBP17.6■□□□□ 0.41
HDAC4-212ENST00000495497 IL7RP16871 459 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 ADH7P40394 386 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 CPA2P48052 419 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 GZMMP51124 257 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 GANABQ14697 944 aaKnown RBP17.6■□□□□ 0.41
HDAC4-212ENST00000495497 C4orf17Q53FE4 359 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 VASNQ6EMK4 673 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 PEX5LQ8IYB4 626 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 ZZZ3Q8IYH5 903 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 CCDC197Q8NCU1 140 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 OR8J3Q8NGG0 315 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 BBS10Q8TAM1 723 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 GPR119Q8TDV5 335 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 CNOT9Q92600 299 aaKnown RBP17.6■□□□□ 0.41
HDAC4-212ENST00000495497 CMTM5Q96DZ9 223 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 LRRC37BQ96QE4 947 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 LAT2Q9GZY6 243 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 BCL2L10Q9HD36 194 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 ARL8BQ9NVJ2 186 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 USP22Q9UPT9 525 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 ESPL1Q14674 2120 aa17.6■□□□□ 0.41
HDAC4-212ENST00000495497 OR2M5A3KFT3 312 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 CCL21O00585 134 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 SLC6A2P23975 617 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 AQP1P29972 269 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 PRDX6P30041 224 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF41P51814 821 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-212ENST00000495497 CASP6P55212 293 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.59■□□□□ 0.41
HDAC4-212ENST00000495497 PLPPR5Q32ZL2 321 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 NHSL2Q5HYW2 709 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 WLSQ5T9L3 541 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 REEP3Q6NUK4 255 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF836Q6ZNA1 936 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 RPRMLQ8N4K4 120 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 POC1BQ8TC44 478 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 PMM1Q92871 262 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 RELTQ969Z4 430 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 DTNBP1Q96EV8 351 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 WDYHV1Q96HA8 205 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 RSPO3Q9BXY4 272 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-212ENST00000495497 EFCAB1Q9HAE3 211 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 HHATLQ9HCP6 504 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 RLIMQ9NVW2 624 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 GMPR2Q9P2T1 348 aaKnown RBP17.59■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF443Q9Y2A4 671 aaPredicted RBP17.59■□□□□ 0.41
HDAC4-212ENST00000495497 SLC35A3Q9Y2D2 325 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 ZNF337Q9Y3M9 751 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 PCNX3Q9H6A9 2034 aa17.59■□□□□ 0.41
HDAC4-212ENST00000495497 ADAM11O75078 769 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 FREM3P0C091 2139 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 LINGO3P0C6S8 592 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 NID1P14543 1247 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 GCKP35557 465 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 NUDT2P50583 147 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms