RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 KLHL18O94889 574 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 F13BP05160 661 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 EDNRAP25101 427 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 CCR6P51684 374 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 LBX1P52954 281 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 RPS21P63220 83 aaKnown RBP12.54□□□□□ -0.4
GPC1-209ENST00000495100 E2F1Q01094 437 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 KCNAB1Q14722 419 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 PRAMEF17Q5VTA0 474 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 GNPDA2Q8TDQ7 276 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 CREB3L4Q8TEY5 395 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 ORAI3Q9BRQ5 295 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 IDSB3KWA1 339 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ZNF670-ZNF695F2Z2N8 137 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 HOXB9P17482 250 aaPredicted RBP12.53□□□□□ -0.4
GPC1-209ENST00000495100 HOXB6P17509 224 aaKnown RBP12.53□□□□□ -0.4
GPC1-209ENST00000495100 BNC1Q01954 994 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 GPR18Q14330 331 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 FAM205BPQ63HN1 556 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 IKBIPQ70UQ0 350 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ATCAYQ86WG3 371 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 TMEM163Q8TC26 289 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 PHOSPHO1Q8TCT1 267 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 VOPP1Q96AW1 172 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 SPATA9Q9BWV2 254 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 SLC38A1Q9H2H9 487 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 KLK4Q9Y5K2 254 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 SCN4AP35499 1836 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ISPDA4D126 451 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 P2RX6O15547 441 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 CTSVO60911 334 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 MT-ND4P03905 459 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 CEACAM5P06731 702 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ACVR2AP27037 513 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
GPC1-209ENST00000495100 ERVK-25P63136 954 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 PSPHP78330 225 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ITPRIPL2Q3MIP1 535 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ALG10BQ5I7T1 473 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 C11orf88Q6PI97 169 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ZAR1Q86SH2 424 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 SLC44A3Q8N4M1 653 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 AVL9Q8NBF6 648 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 SRFBP1Q8NEF9 429 aaKnown RBP12.53□□□□□ -0.4
GPC1-209ENST00000495100 MMABQ96EY8 250 aaPredicted RBP12.53□□□□□ -0.4
GPC1-209ENST00000495100 UBQLN3Q9H347 655 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 MED31Q9Y3C7 131 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 IER3IP1Q9Y5U9 82 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 PRSS38A1L453 326 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 H0YGG7 62 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 LYRM1O43325 122 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 FGF17O60258 216 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 KHDRBS3O75525 346 aaKnown RBP12.53□□□□□ -0.4
GPC1-209ENST00000495100 PSMA3P25788 255 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 IGFALSP35858 605 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 KIR2DL3P43628 341 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 HTR3AP46098 478 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ARF3P61204 181 aaPredicted RBP12.53□□□□□ -0.4
GPC1-209ENST00000495100 PRKCDQ05655 676 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 MZT2AQ6P582 158 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 OR8S1Q8NH09 359 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 BPIFA2Q96DR5 249 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 C1QTNF7Q9BXJ2 289 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 ACTRT3Q9BYD9 372 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 RNF121Q9H920 327 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 SLC6A5Q9Y345 797 aa12.53□□□□□ -0.4
GPC1-209ENST00000495100 TCRBV21S2A2A0A5A6 115 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 C2orf72A6NCS6 295 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 UNC119BA6NIH7 251 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 LGI1O95970 557 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 RECKO95980 971 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 MAGEA8P43361 318 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 OR1Q1Q15612 314 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 ZNHIT3Q15649 155 aaPredicted RBP12.52□□□□□ -0.4
GPC1-209ENST00000495100 ZNF511Q8NB15 262 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 IL17RDQ8NFM7 739 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 OSTF1Q92882 214 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 POP5Q969H6 163 aaKnown RBP12.52□□□□□ -0.4
GPC1-209ENST00000495100 HSPA12BQ96MM6 686 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 EIF3KQ9UBQ5 218 aaKnown RBP12.52□□□□□ -0.4
GPC1-209ENST00000495100 ALG5Q9Y673 324 aa12.52□□□□□ -0.4
GPC1-209ENST00000495100 A0A1W2PPV9 198 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 C4orf47A7E2U8 309 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 CHURC1-FNTBB4DL54 471 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 EFCAB14O75071 495 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 GNRH1P01148 92 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 MAS1P04201 325 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 TBXA2RP21731 343 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 REEP5Q00765 189 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 PDE7AQ13946 482 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 ZNF79Q15937 498 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 THSD4Q6ZMP0 1018 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 RTL4Q6ZR62 310 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 TMIEQ8NEW7 156 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 OR52R1Q8NGF1 315 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 TMEM239Q8WW34 195 aa12.52□□□□□ -0.41
GPC1-209ENST00000495100 ZNF717Q9BY31 904 aaPredicted RBP12.52□□□□□ -0.41
GPC1-209ENST00000495100 ING3Q9NXR8 418 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms