RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TOR1AIP2Q8NFQ8 470 aa15.92■□□□□ 0.14
HDAC4-211ENST00000494800 RNASE6Q93091 150 aaKnown RBP15.92■□□□□ 0.14
HDAC4-211ENST00000494800 INTS12Q96CB8 462 aaKnown RBP15.92■□□□□ 0.14
HDAC4-211ENST00000494800 MARK4Q96L34 752 aa15.92■□□□□ 0.14
HDAC4-211ENST00000494800 OR52B2Q96RD2 323 aa15.92■□□□□ 0.14
HDAC4-211ENST00000494800 SERHL2Q9H4I8 314 aa15.92■□□□□ 0.14
HDAC4-211ENST00000494800 TCF7L2Q9NQB0 619 aa15.92■□□□□ 0.14
HDAC4-211ENST00000494800 SDR39U1Q9NRG7 319 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-211ENST00000494800 PAQR5Q9NXK6 330 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-211ENST00000494800 CARD8Q9Y2G2 431 aa15.92■□□□□ 0.14
HDAC4-211ENST00000494800 ZNF175Q9Y473 711 aa15.92■□□□□ 0.14
HDAC4-211ENST00000494800 C9JVG2 144 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 ZNF195O14628 629 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 ZNF264O43296 627 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 EIF4E2O60573 245 aaKnown RBP15.91■□□□□ 0.14
HDAC4-211ENST00000494800 ANP32DO95626 131 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 KRT75O95678 551 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 CRHP06850 196 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 GUSBP08236 651 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 IL12AP29459 219 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 CASP9P55211 416 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 TLE4Q04727 773 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 PLPPR5Q32ZL2 321 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 FBXL19-AS1Q494R0 122 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 PDSS1Q5T2R2 415 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 PDZK1Q5T2W1 519 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 HEPHL1Q6MZM0 1159 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 MSANTD1Q6ZTZ1 278 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 KIF18BQ86Y91 864 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 RNF145Q96MT1 663 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 ZNF559Q9BR84 538 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 PINK1Q9BXM7 581 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 ZNF350Q9GZX5 532 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 PIGMQ9H3S5 423 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 MKLN1Q9UL63 735 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 LIPT1Q9Y234 373 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 WDR45Q9Y484 360 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 FREM3P0C091 2139 aa15.91■□□□□ 0.14
HDAC4-211ENST00000494800 NAV2Q8IVL1 2488 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 SERINC4A6NH21 518 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 GJE1A6NN92 205 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 SHISA8B8ZZ34 492 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 NPIPB9F8W1W9 429 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 EIF1AYO14602 144 aaKnown RBP15.9■□□□□ 0.14
HDAC4-211ENST00000494800 ADH6P28332 368 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 MAGEA8P43361 318 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 CPA2P48052 419 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 CCR4P51679 360 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 POLR2JP52435 117 aaKnown RBP15.9■□□□□ 0.14
HDAC4-211ENST00000494800 AGFG1P52594 562 aaKnown RBP15.9■□□□□ 0.14
HDAC4-211ENST00000494800 CLDN15P56746 228 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 CLDN20P56880 219 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 RAC1P63000 192 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 CBFBQ13951 182 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 FGFBP1Q14512 234 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 ZNF141Q15928 474 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 GPAT3Q53EU6 434 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.9■□□□□ 0.14
HDAC4-211ENST00000494800 EIF3MQ7L2H7 374 aaKnown RBP15.9■□□□□ 0.14
HDAC4-211ENST00000494800 RNF130Q86XS8 419 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 ZNF295-AS1Q8N0V1 137 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 GCNT2Q8N0V5 402 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 METTL25Q8N6Q8 603 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 RAB8BQ92930 207 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 ROPN1LQ96C74 230 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 ITCHQ96J02 903 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 PRRG4Q9BZD6 226 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 SLCO1B3Q9NPD5 702 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 ICAM5Q9UMF0 924 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 GPC6Q9Y625 555 aaPredicted RBP15.9■□□□□ 0.14
HDAC4-211ENST00000494800 CACNA1CQ13936 2221 aa15.9■□□□□ 0.14
HDAC4-211ENST00000494800 ARHGAP21Q5T5U3 1957 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 UQCRHLA0A096LP55 91 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 FAM234BA2RU67 622 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 FCMRO60667 390 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 TGM6O95932 706 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 CSTAP01040 98 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 GSNP06396 782 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 LINGO3P0C6S8 592 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 ELK4P28324 431 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 KIR2DL3P43628 341 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 EIF1AXP47813 144 aaKnown RBP15.89■□□□□ 0.13
HDAC4-211ENST00000494800 SUCLG1P53597 346 aaKnown RBP15.89■□□□□ 0.13
HDAC4-211ENST00000494800 AQP5P55064 265 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 IRX1P78414 480 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-211ENST00000494800 PON3Q15166 354 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 PPP4R4Q6NUP7 873 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 POMZP3Q6PJE2 187 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 ESPNLQ6ZVH7 1005 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 OR5W2Q8NH69 310 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 RFWD2Q8NHY2 731 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 MAGEB18Q96M61 343 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 INPP5KQ9BT40 448 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 CCDC28BQ9BUN5 200 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 MCCC2Q9HCC0 563 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 PACSIN3Q9UKS6 424 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 MCTS1Q9ULC4 181 aaKnown RBP15.89■□□□□ 0.13
HDAC4-211ENST00000494800 SLC35A3Q9Y2D2 325 aa15.89■□□□□ 0.13
HDAC4-211ENST00000494800 ADGRG4Q8IZF6 3080 aa15.88■□□□□ 0.13
HDAC4-211ENST00000494800 H0YC42 278 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms