RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SNTA1Q13424 505 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 SH2D4BQ5SQS7 431 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 RIPPLY2Q5TAB7 128 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 OR5M10Q6IEU7 315 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 TMEM81Q6P7N7 255 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 TMEM107Q6UX40 140 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 NPSR1Q6W5P4 371 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 Q6ZSR9 355 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 TRABD2AQ86V40 505 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 LIX1LQ8IVB5 337 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 ULK2Q8IYT8 1036 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 RIBC1Q8N443 379 aaPredicted RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 BANPQ8N9N5 519 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 WDSUB1Q8N9V3 476 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 ACBD4Q8NC06 268 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 FAM83FQ8NEG4 500 aaPredicted RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 OR4N2Q8NGD1 307 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 NRG4Q8WWG1 115 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 HOXB13Q92826 284 aaPredicted RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 ABTB1Q969K4 478 aaPredicted RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 C14orf79Q96F83 325 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 SLC35A4Q96G79 324 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 APOPT1Q96IL0 206 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 METTL2AQ96IZ6 378 aaKnown RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 LURAP1Q96LR2 239 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 VSTM2LQ96N03 204 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 COL21A1Q96P44 957 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 FAM111AQ96PZ2 611 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 BTBD9Q96Q07 612 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 OSBPL11Q9BXB4 747 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 STMN4Q9H169 189 aaPredicted RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 GLIPR2Q9H4G4 154 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 FOLH1BQ9HBA9 442 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 LRTM1Q9HBL6 345 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 MYNNQ9NPC7 610 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 SERHLQ9NQF3 203 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 C1orf109Q9NX04 203 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 TAS2R7Q9NYW3 318 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 EXO1Q9UQ84 846 aaKnown RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 CAMK2AQ9UQM7 478 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 WBP11Q9Y2W2 641 aaKnown RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 OR10H1Q9Y4A9 318 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 CCL27Q9Y4X3 112 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 DNAJC15Q9Y5T4 150 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 PTGDR2Q9Y5Y4 395 aa7.34□□□□□ -1.23
RIF1-211ENST00000494333 NCOA6Q14686 2063 aaPredicted RBP7.34□□□□□ -1.23
RIF1-211ENST00000494333 ZNF407Q9C0G0 2248 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 A0A087WV62 115 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 HSPB2A8KAH6 182 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 KDM4EB2RXH2 506 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 UPK1AO00322 258 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 PLOD2O00469 737 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 HOXA3O43365 443 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 TSPAN2O60636 221 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 COQ9O75208 318 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 CHEK2O96017 543 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 CHRNGP07510 517 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 FGF4P08620 206 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 IGFBP2P18065 325 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 PRPH2P23942 346 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 IL12BP29460 328 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 NTSP30990 170 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 SELENOPP49908 381 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 WNT3P56703 355 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 KRTAP10-9P60411 292 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 PSG6Q00889 435 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 TLE4Q04727 773 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 EFR3AQ14156 821 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 SF3B4Q15427 424 aaKnown RBP eCLIP7.33□□□□□ -1.247e-7■■■■□ 24
RIF1-211ENST00000494333 HSPB2Q16082 182 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 SPATS1Q496A3 300 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 RFTN2Q52LD8 501 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 ARL13AQ5H913 290 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 NHSL2Q5HYW2 709 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 ANKRD26P1Q6NSI1 321 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 SEM1Q6ZVN7 128 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 IKBIPQ70UQ0 350 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 WDR53Q7Z5U6 358 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 PLCZ1Q86YW0 608 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 DDIASQ8IXT1 998 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 PM20D2Q8IYS1 436 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 CLYBLQ8N0X4 340 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 TNIP2Q8NFZ5 429 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 OR2T11Q8NH01 316 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 OR14L1PQ8NHC6 308 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 TCP10LQ8TDR4 215 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 EFHD2Q96C19 240 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 ELP4Q96EB1 424 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 WDYHV1Q96HA8 205 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 AMDHD1Q96NU7 426 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 TRIB1Q96RU8 372 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 TREX2Q9BQ50 279 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 TRMOQ9BU70 441 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 MECRQ9BV79 373 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 UGT2B28Q9BY64 529 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 ROPN1BQ9BZX4 212 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 TUBB1Q9H4B7 451 aa7.33□□□□□ -1.24
RIF1-211ENST00000494333 ROPN1Q9HAT0 212 aaPredicted RBP7.33□□□□□ -1.24
RIF1-211ENST00000494333 DDX18Q9NVP1 670 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms