RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 C10orf67Q8IYJ2 551 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TDHQ8IZJ6 230 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CDK20Q8IZL9 346 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF444Q8N0Y2 327 aaPredicted RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TMEM123Q8N131 208 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ALLCQ8N6M5 410 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CCDC185Q8N715 623 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CCNYL1Q8N7R7 359 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CYB561A3Q8NBI2 242 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 NECAP1Q8NC96 275 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF248Q8NDW4 579 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 FBXO36Q8NEA4 188 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 C19orf18Q8NEA5 215 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CCDC112Q8NEF3 446 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 GJC3Q8NFK1 279 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 OR5AU1Q8NGC0 362 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 OR4N2Q8NGD1 307 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 OR4D6Q8NGJ1 314 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 OR51G2Q8NGK0 314 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 OR9G4Q8NGQ1 327 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 OR1L4Q8NGR5 311 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 OR2AJ1Q8NGZ0 328 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SPATA22Q8NHS9 363 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SMPDL3AQ92484 453 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 RPL3LQ92901 407 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SMARCD2Q92925 531 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 HIST1H2ACQ93077 130 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TMEM45BQ96B21 275 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SH3YL1Q96HL8 342 aaPredicted RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 C9orf72Q96LT7 481 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF578Q96N58 590 aaPredicted RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TSSK2Q96PF2 358 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TSSK3Q96PN8 268 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SLC22A12Q96S37 553 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CGREF1Q99674 301 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 NAPGQ99747 312 aaPredicted RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CIB1Q99828 191 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 PRMT1Q99873 361 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF251Q9BRH9 671 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 C7orf50Q9BRJ6 194 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 C16orf70Q9BSU1 422 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 NAT9Q9BTE0 207 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 DCTN5Q9BTE1 182 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 LMF2Q9BU23 707 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 PARD6GQ9BYG4 376 aaPredicted RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 LRRC2Q9BYS8 371 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 MIS12Q9H081 205 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 OR2AG1Q9H205 316 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SLC38A1Q9H2H9 487 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 DPAGT1Q9H3H5 408 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 LRRN3Q9H3W5 708 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 DPEP2Q9H4A9 486 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ACTL8Q9H568 366 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SLA2Q9H6Q3 261 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 TRIM45Q9H8W5 580 aaPredicted RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 MARCH7Q9H992 704 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CD209Q9NNX6 404 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 RAB18Q9NP72 206 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CHST11Q9NPF2 352 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ADAP2Q9NPF8 381 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 IMP3Q9NV31 184 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 C1RLQ9NZP8 487 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 GAGE2DQ9UEU5 116 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 EPHA6Q9UF33 1036 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 LCMT1Q9UIC8 334 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 PHF11Q9UIL8 331 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SIX4Q9UIU6 781 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 IKZF2Q9UKS7 526 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ZNF346Q9UL40 294 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 SCML1Q9UN30 329 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 POFUT2Q9Y2G5 429 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 V9GYQ6 96 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 ATP10DQ9P241 1426 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 CACNA1FO60840 1977 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 LRPPRCP42704 1394 aaKnown RBP1.98□□□□□ -2.09
PTPN12-212ENST00000494248 MAP3K5Q99683 1374 aa1.98□□□□□ -2.09
PTPN12-212ENST00000494248 GRIN2DO15399 1336 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ELP1O95163 1332 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 KCNE1BA0A087WTH5 132 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 A0A1B0GW15 77 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 A0A1W2PS18 150 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 FABP12A6NFH5 140 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 EIF4E1BA6NMX2 242 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 E5RI56 91 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 E7EWF7 191 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 NPIPA3F8WFD2 350 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PRAMEF26H0Y7S4 382 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 H0YJX3 145 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MKRN2OSH3BPM6 223 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 KLRC4-KLRK1H3BQV0 150 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PGRMC1O00264 195 aaKnown RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 CHUKO15111 745 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 MID1O15344 667 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 TOX3O15405 576 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-212ENST00000494248 LATO43561 262 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 PLPP2O43688 288 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 ATP6AP2O75787 350 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 GRAP2O75791 330 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 VAPBO95292 243 aa1.97□□□□□ -2.09
PTPN12-212ENST00000494248 RAB3DO95716 219 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms