RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 POLE3Q9NRF9 147 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 SHISA8B8ZZ34 492 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 KIAA0513O60268 411 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 OR12D1P0DN82 309 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 PSMA4P25789 261 aaKnown RBP20.4■□□□□ 0.86
SNIP1-203ENST00000493916 CDKN2CP42773 168 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 SUCLG1P53597 346 aaKnown RBP20.4■□□□□ 0.86
SNIP1-203ENST00000493916 CLDN20P56880 219 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 MIER2Q8N344 545 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 METTL25Q8N6Q8 603 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 KLHDC3Q9BQ90 382 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 TCF7L2Q9NQB0 619 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 STOML1Q9UBI4 398 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 ICAM5Q9UMF0 924 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 TACC2O95359 2948 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 ABCA12Q86UK0 2595 aa20.4■□□□□ 0.86
SNIP1-203ENST00000493916 SLC22A20A6NK97 555 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 SYT5O00445 386 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 RFXANKO14593 260 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 POLR3GO15318 223 aaPredicted RBP20.39■□□□□ 0.85
SNIP1-203ENST00000493916 SEC14L5O43304 696 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 OIP5O43482 229 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 FCMRO60667 390 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 TNFRSF21O75509 655 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 LINGO3P0C6S8 592 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 IDH3AP50213 366 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 P2RX1P51575 399 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 FUT5Q11128 374 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 PDZK1Q5T2W1 519 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 CBLN3Q6UW01 205 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 PLXDC2Q6UX71 529 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 GGNQ86UU5 652 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 CKAP2Q8WWK9 683 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 XAGE5Q8WWM1 108 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 RAB8BQ92930 207 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 LRRC46Q96FV0 321 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 MAGEB18Q96M61 343 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 CCDC28BQ9BUN5 200 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 JKAMPQ9P055 326 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 KCNE5Q9UJ90 142 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 CARD8Q9Y2G2 431 aa20.39■□□□□ 0.85
SNIP1-203ENST00000493916 SERINC4A6NH21 518 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 H0YC42 278 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 GTPBP1O00178 669 aaKnown RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 HMGN4O00479 90 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 EIF4E2O60573 245 aaKnown RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 TGM6O95932 706 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 UBL4AP11441 157 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 EIF1P41567 113 aaKnown RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 MAGEA8P43361 318 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 ANXA11P50995 505 aaKnown RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 POLR2JP52435 117 aaKnown RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 TPD52P55327 224 aaPredicted RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 DLX5P56178 289 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 EEF1A1P68104 462 aaKnown RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 GPR68Q15743 365 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 EEF1A1P5Q5VTE0 462 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 TYW3Q6IPR3 259 aaKnown RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 ZNF621Q6ZSS3 439 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 RNF130Q86XS8 419 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 ZNF614Q8N883 585 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 OR9I1Q8NGQ6 314 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 POC1BQ8TC44 478 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 SMPDL3BQ92485 455 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 RNASE6Q93091 150 aaKnown RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 ROPN1LQ96C74 230 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 RNF145Q96MT1 663 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 NPAS1Q99742 590 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 SAP130Q9H0E3 1048 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 RMND5AQ9H871 391 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 KCNN3Q9UGI6 736 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 FOXD3Q9UJU5 478 aaPredicted RBP20.38■□□□□ 0.85
SNIP1-203ENST00000493916 MKLN1Q9UL63 735 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 ZNF175Q9Y473 711 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 WDR45Q9Y484 360 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 PKDREJQ9NTG1 2253 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 DOCK7Q96N67 2140 aa20.38■□□□□ 0.85
SNIP1-203ENST00000493916 PCNX3Q9H6A9 2034 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 CACNA1DQ01668 2161 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 FAM234BA2RU67 622 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 ZNF264O43296 627 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 UGT2B17O75795 530 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 C1QCP02747 245 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 CRHP06850 196 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 ELK4P28324 431 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 PEX19P40855 299 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 RNF144AP50876 292 aaPredicted RBP20.37■□□□□ 0.85
SNIP1-203ENST00000493916 RPS3AP61247 264 aaKnown RBP20.37■□□□□ 0.85
SNIP1-203ENST00000493916 RAC1P63000 192 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 FOXF2Q12947 444 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 TIGD2Q4W5G0 525 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 OR2A2Q6IF42 318 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 FRRS1Q6ZNA5 592 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 P4HA3Q7Z4N8 544 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 TOR1AIP2Q8NFQ8 470 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 STON2Q8WXE9 905 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 INTS12Q96CB8 462 aaKnown RBP20.37■□□□□ 0.85
SNIP1-203ENST00000493916 ARSGQ96EG1 525 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 ADGRG7Q96K78 797 aa20.37■□□□□ 0.85
SNIP1-203ENST00000493916 EBF4Q9BQW3 602 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms