RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GNG2P59768 71 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 LARS2Q15031 903 aaKnown RBP12.8□□□□□ -0.36
VCP-207ENST00000493886 PRICKLE4Q2TBC4 344 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 EXOSC6Q5RKV6 272 aaKnown RBP12.8□□□□□ -0.36
VCP-207ENST00000493886 ARMC4Q5T2S8 1044 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 ZNF730Q6ZMV8 503 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 ZNF836Q6ZNA1 936 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 PLEKHM3Q6ZWE6 761 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 PRICKLE2Q7Z3G6 844 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 KCTD20Q7Z5Y7 419 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 C19orf47Q8N9M1 422 aaKnown RBP12.8□□□□□ -0.36
VCP-207ENST00000493886 GNPDA2Q8TDQ7 276 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 MCHR1Q99705 422 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 ANKRD19PQ9H560 264 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 MAT2BQ9NZL9 334 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 GPR52Q9Y2T5 361 aa12.8□□□□□ -0.36
VCP-207ENST00000493886 MYL12BO14950 172 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 PRKYO43930 277 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 CDRT1O95170 752 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 CDK5Q00535 292 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 GPR68Q15743 365 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 ACSM5Q6NUN0 579 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 KIF18BQ86Y91 864 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 CCDC28AQ8IWP9 274 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 ZFP41Q8N8Y5 198 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 CDRT4Q8N9R6 151 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 SYT14Q8NB59 555 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 AVL9Q8NBF6 648 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 OR9A4Q8NGU2 314 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 ASB15Q8WXK1 588 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 TM9SF2Q99805 663 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 POLDIP3Q9BY77 421 aaKnown RBP12.79□□□□□ -0.36
VCP-207ENST00000493886 ZNF350Q9GZX5 532 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 MMP28Q9H239 520 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 BOLA1Q9Y3E2 137 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 CENPVL1A0A0U1RR11 272 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 SLC9B1P1A6NJY1 282 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 UBXN7O94888 489 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 ALX3O95076 343 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 SCG5P05408 212 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 KRT8P05787 483 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 CT62P0C5K7 136 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 PSMA1P25786 263 aaKnown RBP12.79□□□□□ -0.36
VCP-207ENST00000493886 CAV3P56539 151 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 MGAT2Q10469 447 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 DUSP8Q13202 625 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 EXOSC7Q15024 291 aaKnown RBP12.79□□□□□ -0.36
VCP-207ENST00000493886 OCLNQ16625 522 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 DCST2Q5T1A1 773 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 OR2G6Q5TZ20 316 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 MEDAGQ5VYS4 303 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 C22orf42Q6IC83 251 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 TMPRSS11AQ6ZMR5 421 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 RRM2BQ7LG56 351 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 MCATQ8IVS2 390 aaKnown RBP12.79□□□□□ -0.36
VCP-207ENST00000493886 ANKRD9Q96BM1 317 aaPredicted RBP12.79□□□□□ -0.36
VCP-207ENST00000493886 ZNF486Q96H40 463 aaPredicted RBP12.79□□□□□ -0.36
VCP-207ENST00000493886 TMEM80Q96HE8 168 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 BEX2Q9BXY8 128 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 PLA2G12AQ9BZM1 189 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 EGLN3Q9H6Z9 239 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 BRD7Q9NPI1 651 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 DUSP22Q9NRW4 184 aa12.79□□□□□ -0.36
VCP-207ENST00000493886 RPL36Q9Y3U8 105 aaKnown RBP12.79□□□□□ -0.36
VCP-207ENST00000493886 SNX4O95219 450 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CSF2P04141 144 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CSTF2P33240 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
VCP-207ENST00000493886 TSPAN31Q12999 210 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 ELOCQ15369 112 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 AGAP6Q5VW22 663 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 ZNF704Q6ZNC4 412 aaPredicted RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 NKAIN4Q8IVV8 208 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 ZNF619Q8N2I2 560 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 ARHGEF39Q8N4T4 335 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 FAM26EQ8N5C1 309 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 COX18Q8N8Q8 333 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 PIK3R3Q92569 461 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 AGAP4Q96P64 663 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 IFT22Q9H7X7 185 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CNIH4Q9P003 139 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 LSM2Q9Y333 95 aaKnown RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 A0A1W2PQ09 198 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 H0YC42 278 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CHST10O43529 356 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 IDH3BO43837 385 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 STX11O75558 287 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 M6PRP20645 277 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CD27P26842 260 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CD38P28907 300 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CRYBB2P43320 205 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 SMSP52788 366 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 EEF1A1P68104 462 aaKnown RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 DBPQ10586 325 aaPredicted RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 HNRNPA0Q13151 305 aaKnown RBP12.78□□□□□ -0.36
VCP-207ENST00000493886 ZNF79Q15937 498 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 EIPR1Q53HC9 387 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 ZCCHC12Q6PEW1 402 aa12.78□□□□□ -0.36
VCP-207ENST00000493886 CHRDL2Q6WN34 429 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms