RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 A0A0G2JPF8 293 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 HNRNPCL2B2RXH8 293 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 HNRNPCL3B7ZW38 293 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 E9PLN8 166 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 OIP5O43482 229 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 HNRNPCL1O60812 293 aaKnown RBP12.66□□□□□ -0.38
CCM2-217ENST00000492883 WDR1O75083 606 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 NPPAP01160 153 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 DBIP07108 87 aaKnown RBP12.66□□□□□ -0.38
CCM2-217ENST00000492883 HNRNPCL4P0DMR1 293 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 COX4I1P13073 169 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 GABRA1P14867 456 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 CHMP24386 653 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 ADH7P40394 386 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 STARP49675 285 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 SUMO3P55854 103 aaPredicted RBP12.66□□□□□ -0.38
CCM2-217ENST00000492883 GFRA1P56159 465 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 MTPNP58546 118 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 SRYQ05066 204 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 FGFBP1Q14512 234 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 MAPK11Q15759 364 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 TRMT5Q32P41 509 aaKnown RBP12.66□□□□□ -0.38
CCM2-217ENST00000492883 EMC4Q5J8M3 183 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 RPS26P11Q5JNZ5 115 aaPredicted RBP12.66□□□□□ -0.38
CCM2-217ENST00000492883 TMEM211Q6ICI0 200 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 METTL25Q8N6Q8 603 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 TOR1AIP2Q8NFQ8 470 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 OR52P1PQ8NH57 321 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 OR5W2Q8NH69 310 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 SSC4DQ8WTU2 575 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 LRRC58Q96CX6 371 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 WDYHV1Q96HA8 205 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 CCT8L2Q96SF2 557 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 SH3GL1Q99961 368 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 TREX2Q9BQ50 279 aaPredicted RBP12.66□□□□□ -0.38
CCM2-217ENST00000492883 VKORC1Q9BQB6 163 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 TRIM8Q9BZR9 551 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 LAT2Q9GZY6 243 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 MED17Q9NVC6 651 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 ADAM21Q9UKJ8 722 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 ICAM5Q9UMF0 924 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 ZNF232Q9UNY5 417 aa12.66□□□□□ -0.38
CCM2-217ENST00000492883 CLEC18AA5D8T8 446 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 CLDN24A6NM45 220 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 AHRRA9YTQ3 701 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 LINC01387J3KSC0 135 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 AIM2O14862 343 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 HOXD4P09016 255 aaPredicted RBP12.65□□□□□ -0.38
CCM2-217ENST00000492883 ARAFP10398 606 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 SLC6A2P23975 617 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 ACVR2AP27037 513 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 PGM1P36871 562 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 B3GALT5-AS1P59052 145 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 CDK6Q00534 326 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 CBFBQ13951 182 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 SELPLGQ14242 412 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 LARS2Q15031 903 aaKnown RBP12.65□□□□□ -0.38
CCM2-217ENST00000492883 SF3B4Q15427 424 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCM2-217ENST00000492883 CYP51A1Q16850 503 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 DCST1Q5T197 706 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 PRAMEF8Q5VWM4 474 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 PRAMEF7Q5VXH5 474 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 NANOGP8Q6NSW7 305 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 CLEC18BQ6UXF7 455 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 CMIPQ8IY22 773 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 C10orf111Q8N326 155 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 CLEC18CQ8NCF0 446 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 NFKBIDQ8NI38 313 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 BBS10Q8TAM1 723 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 WDR60Q8WVS4 1066 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 ZBTB8AQ96BR9 441 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 CMTM5Q96DZ9 223 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 SLC39A3Q9BRY0 314 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 MYLK2Q9H1R3 596 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 TMEM38AQ9H6F2 299 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 NANOGQ9H9S0 305 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 BCL2L10Q9HD36 194 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 STOML1Q9UBI4 398 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 ZNF337Q9Y3M9 751 aa12.65□□□□□ -0.38
CCM2-217ENST00000492883 OR2M5A3KFT3 312 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 SHISA8B8ZZ34 492 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 H0Y3Z8 333 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 H3BML4 177 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 ZG16O60844 167 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 PGM3O95394 542 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 PEPDP12955 493 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 NID1P14543 1247 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 CPN1P15169 458 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 POU3F2P20265 443 aaPredicted RBP12.64□□□□□ -0.39
CCM2-217ENST00000492883 RYKP34925 604 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 PTGER4P35408 488 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 SMSP52788 366 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 PMPCAQ10713 525 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 SKP2Q13309 424 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 ART3Q13508 389 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 SCARB2Q14108 478 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 PLPPR5Q32ZL2 321 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 C1orf185Q5T7R7 199 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 GKAP1Q5VSY0 366 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms