RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ADSLP30566 484 aaPredicted RBP11.16□□□□□ -0.62
COL6A1-205ENST00000492851 P2RX1P51575 399 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 ATP12AP54707 1039 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 EXOC3L2Q2M3D2 409 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 BEX5Q5H9J7 111 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 IL23RQ5VWK5 629 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 GALNT10Q86SR1 603 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 GATSQ8NAP1 163 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 LRRN4CLQ8ND94 238 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 OR7A2PQ8NGA2 310 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 OR2W6PQ8NHA6 318 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 PPP1R14CQ8TAE6 165 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 OSTF1Q92882 214 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 CPNE4Q96A23 557 aaPredicted RBP11.16□□□□□ -0.62
COL6A1-205ENST00000492851 POM121Q96HA1 1249 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 SH3YL1Q96HL8 342 aaPredicted RBP11.16□□□□□ -0.62
COL6A1-205ENST00000492851 KLHL15Q96M94 604 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 TACO1Q9BSH4 297 aaKnown RBP11.16□□□□□ -0.62
COL6A1-205ENST00000492851 SIRT3Q9NTG7 399 aaPredicted RBP11.16□□□□□ -0.62
COL6A1-205ENST00000492851 PCDHGB4Q9UN71 923 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 C2CD3Q4AC94 2353 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 TMEM233B4DJY2 109 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 SHISA8B8ZZ34 492 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 TNFSF11O14788 317 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 CFLARO15519 480 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 CXCL13O43927 109 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 EIF4E2O60573 245 aaKnown RBP11.15□□□□□ -0.62
COL6A1-205ENST00000492851 SPAG7O75391 227 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 AGR2O95994 175 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 AK1P00568 194 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 BPGMP07738 259 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 CLDN8P56748 225 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 C21orf58P58505 322 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 EMX2Q04743 252 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 PTGR1Q14914 329 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 CTU2Q2VPK5 515 aaKnown RBP11.15□□□□□ -0.62
COL6A1-205ENST00000492851 TMEM201Q5SNT2 666 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 DCST2Q5T1A1 773 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 CCNJQ5T5M9 372 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 CXorf67Q86X51 503 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-205ENST00000492851 NUDCD3Q8IVD9 361 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 SLC43A2Q8N370 569 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 WFDC11Q8NEX6 87 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 VPS37AQ8NEZ2 397 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 TOR1AIP2Q8NFQ8 470 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 STEAP2Q8NFT2 490 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 FBXO30Q8TB52 745 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 AGR3Q8TD06 166 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 OIT3Q8WWZ8 545 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 CDS1Q92903 461 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 TUBGCP3Q96CW5 907 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 MRGPRX4Q96LA9 322 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 CCL19Q99731 98 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 BDH2Q9BUT1 245 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 DUSP26Q9BV47 211 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 MECRQ9BV79 373 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 TMEM109Q9BVC6 243 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 ANKZF1Q9H8Y5 726 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 NGBQ9NPG2 151 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 GPATCH2Q9NW75 528 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 FBXO34Q9NWN3 711 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 NOP53Q9NZM5 478 aaKnown RBP11.15□□□□□ -0.62
COL6A1-205ENST00000492851 SLC17A7Q9P2U7 560 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 ZDHHC2Q9UIJ5 367 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 DTNAQ9Y4J8 743 aa11.15□□□□□ -0.62
COL6A1-205ENST00000492851 MAP1AP78559 2803 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-205ENST00000492851 A0A0J9YW62 118 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 A0A1W2PPR1 153 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF195O14628 629 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF264O43296 627 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 PRKD3O94806 890 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 INHBBP09529 407 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 PSMB1P20618 241 aaKnown RBP11.14□□□□□ -0.63
COL6A1-205ENST00000492851 SLC6A8P48029 635 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF117Q03924 483 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 CBFBQ13951 182 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 CD226Q15762 336 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 PLEKHM3Q6ZWE6 761 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 SSX8Q7RTT4 187 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 ZNF550Q7Z398 422 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 ZAR1Q86SH2 424 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 RIMKLAQ8IXN7 391 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 OR5W2Q8NH69 310 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 POC1BQ8TC44 478 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 ZC3HAV1LQ96H79 300 aaKnown RBP11.14□□□□□ -0.63
COL6A1-205ENST00000492851 MARK4Q96L34 752 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 C1orf50Q9BV19 199 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 CXorf36Q9H7Y0 433 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 UBTD1Q9HAC8 227 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 EXD2Q9NVH0 621 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 ASIC5Q9NY37 505 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 ICAM5Q9UMF0 924 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 CARD8Q9Y2G2 431 aa11.14□□□□□ -0.63
COL6A1-205ENST00000492851 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.14□□□□□ -0.63
COL6A1-205ENST00000492851 HRNRQ86YZ3 2850 aaPredicted RBP11.14□□□□□ -0.63
COL6A1-205ENST00000492851 BIRC5O15392 142 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 TYROBPO43914 113 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 STX11O75558 287 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 C6orf47O95873 294 aa11.13□□□□□ -0.63
COL6A1-205ENST00000492851 OPN1LWP04000 364 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms