RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 LSM12Q3MHD2 195 aaKnown RBP16.46■□□□□ 0.23
SMIM4-205ENST00000491607 DCST2Q5T1A1 773 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 SHEQ5VZ18 495 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 CDC73Q6P1J9 531 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 C22orf34Q6ZV56 151 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 KRTAP1-3Q8IUG1 177 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 LILRA2Q8N149 483 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 KRTCAP2Q8N6L1 136 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 OR56A1Q8NGH5 318 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 POC1BQ8TC44 478 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 NUDT8Q8WV74 236 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 PIGTQ969N2 578 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 TUBGCP3Q96CW5 907 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 C18orf12Q96KH6 178 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 PRPF18Q99633 342 aaKnown RBP16.46■□□□□ 0.23
SMIM4-205ENST00000491607 CCL19Q99731 98 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 SMR3AQ99954 134 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 ACTRT3Q9BYD9 372 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 CXorf36Q9H7Y0 433 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 PLSCR4Q9NRQ2 329 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 ZDHHC2Q9UIJ5 367 aa16.46■□□□□ 0.23
SMIM4-205ENST00000491607 H3BNH8 94 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 LYPLA1O75608 230 aaPredicted RBP16.45■□□□□ 0.22
SMIM4-205ENST00000491607 LINGO3P0C6S8 592 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 HOXB4P17483 251 aaPredicted RBP16.45■□□□□ 0.22
SMIM4-205ENST00000491607 IL11P20809 199 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 ARRB2P32121 409 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 EIF1P41567 113 aaKnown RBP16.45■□□□□ 0.22
SMIM4-205ENST00000491607 FOXF1Q12946 379 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 KRTAP21-3Q3LHN1 58 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 Q5PR19 223 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 MTERF4Q7Z6M4 381 aaKnown RBP16.45■□□□□ 0.22
SMIM4-205ENST00000491607 BIVMQ86UB2 503 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 NATD1Q8N6N6 113 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 ZNF614Q8N883 585 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 OR5AK3PQ8NH89 298 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 CAVIN3Q969G5 261 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 KLHL15Q96M94 604 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 HOXD1Q9GZZ0 328 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 C12orf49Q9H741 205 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 FANCFQ9NPI8 374 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 GLRX2Q9NS18 164 aa16.45■□□□□ 0.22
SMIM4-205ENST00000491607 MAP1AP78559 2803 aaPredicted RBP16.45■□□□□ 0.22
SMIM4-205ENST00000491607 BPGMP07738 259 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 KRT16P08779 473 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 CREB1P16220 341 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 PRPS1L1P21108 318 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 SOAT1P35610 550 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 CARD18P57730 90 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 GTF2IRD2BQ6EKJ0 949 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 CBLN3Q6UW01 205 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 Q71RC1 249 aaPredicted RBP16.44■□□□□ 0.22
SMIM4-205ENST00000491607 GTF2IRD2Q86UP8 949 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 STK32CQ86UX6 486 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 PSMA8Q8TAA3 256 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 PPP1R14CQ8TAE6 165 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 ROBO4Q8WZ75 1007 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 OSTF1Q92882 214 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 REXO5Q96IC2 774 aaKnown RBP16.44■□□□□ 0.22
SMIM4-205ENST00000491607 ROPN1BQ9BZX4 212 aaPredicted RBP16.44■□□□□ 0.22
SMIM4-205ENST00000491607 BHLHE41Q9C0J9 482 aaPredicted RBP16.44■□□□□ 0.22
SMIM4-205ENST00000491607 ZNF395Q9H8N7 513 aaPredicted RBP16.44■□□□□ 0.22
SMIM4-205ENST00000491607 ROPN1Q9HAT0 212 aaPredicted RBP16.44■□□□□ 0.22
SMIM4-205ENST00000491607 GPATCH2Q9NW75 528 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 CARD8Q9Y2G2 431 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 KCNE3Q9Y6H6 103 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 PCNX3Q9H6A9 2034 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 ABCA4P78363 2273 aa16.44■□□□□ 0.22
SMIM4-205ENST00000491607 GTPBP1O00178 669 aaKnown RBP16.43■□□□□ 0.22
SMIM4-205ENST00000491607 OIP5O43482 229 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 TUBBP07437 444 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 INHBBP09529 407 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 PPP3CBP16298 524 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 SHC1P29353 583 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 AGTR1P30556 359 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 P2RX1P51575 399 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 PGS1Q32NB8 556 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 KLHL26Q53HC5 615 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 STAC2Q6ZMT1 411 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 BEND4Q6ZU67 534 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 LRRC75A-AS1Q8N1F1 130 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 ATP6V1C2Q8NEY4 427 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 RFWD2Q8NHY2 731 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 FBXO27Q8NI29 283 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 SFXN5Q8TD22 340 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 MOAP1Q96BY2 351 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 COQ8BQ96D53 544 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 MARK4Q96L34 752 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 PIP5K1AQ99755 562 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 DUSP26Q9BV47 211 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 TIGARQ9NQ88 270 aa16.43■□□□□ 0.22
SMIM4-205ENST00000491607 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.42■□□□□ 0.22
SMIM4-205ENST00000491607 GJE1A6NN92 205 aa16.42■□□□□ 0.22
SMIM4-205ENST00000491607 THBDP07204 575 aa16.42■□□□□ 0.22
SMIM4-205ENST00000491607 PABPC4LP0CB38 370 aaKnown RBP16.42■□□□□ 0.22
SMIM4-205ENST00000491607 G6PDP11413 515 aa16.42■□□□□ 0.22
SMIM4-205ENST00000491607 ELK4P28324 431 aa16.42■□□□□ 0.22
SMIM4-205ENST00000491607 ATP12AP54707 1039 aa16.42■□□□□ 0.22
SMIM4-205ENST00000491607 MAD2L1Q13257 205 aaPredicted RBP16.42■□□□□ 0.22
SMIM4-205ENST00000491607 ZNF239Q16600 458 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms