RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 FAM214BQ7L5A3 538 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 P3H2Q8IVL5 708 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 RIMKLAQ8IXN7 391 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 LILRA2Q8N149 483 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 GTPBP8Q8N3Z3 284 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-211ENST00000491581 FNDC5Q8NAU1 212 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 CHDHQ8NE62 594 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-211ENST00000491581 OR6Y1Q8NGX8 325 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 OR2V1Q8NHB1 315 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 B4GALNT2Q8NHY0 566 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 OSTF1Q92882 214 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 RAB8BQ92930 207 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 TUBGCP3Q96CW5 907 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 Q96MF0 132 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 ZFP3Q96NJ6 502 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 OR7D2Q96RA2 312 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 BTBD2Q9BX70 525 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 PRRG4Q9BZD6 226 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 COQ10BQ9H8M1 238 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 MKS1Q9NXB0 559 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 LGALS13Q9UHV8 139 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 PRSS50Q9UI38 385 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 AP4B1Q9Y6B7 739 aa7.95□□□□□ -1.14
HDAC3-211ENST00000491581 ABCA4P78363 2273 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 PRAMEF27A3QJZ7 478 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ESPNB1AK53 854 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 C16orf97H3BN30 126 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 SCDO00767 359 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 CFLARO15519 480 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ADAM11O75078 769 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 SS18L1O75177 396 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 CYP7B1O75881 506 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 H6PDO95479 791 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 NUDT14O95848 222 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 PLGP00747 810 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 NUDT17P0C025 328 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 CD8BP10966 210 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 HPCAL1P37235 193 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 CLK3P49761 638 aaKnown RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 CCR4P51679 360 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 IFFO1Q0D2I5 559 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 FUT5Q11128 374 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 GPR68Q15743 365 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 CHI3L2Q15782 390 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 SPDYE7PQ495Y7 208 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 KLHL26Q53HC5 615 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 PDZK1Q5T2W1 519 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 CPTPQ5TA50 214 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 OR2A2Q6IF42 318 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 TUSC5Q8IXB3 177 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 TMCO5AQ8N6Q1 288 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 LILRB1Q8NHL6 650 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 CEP70Q8NHQ1 597 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ZFP28Q8NHY6 868 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ZG16BQ96DA0 208 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 TRIM44Q96DX7 344 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 PLPPR2Q96GM1 343 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 TEX37Q96LM6 180 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF300Q96RE9 604 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 SORT1Q99523 831 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 IQCGQ9H095 443 aaKnown RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 PIGUQ9H490 435 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 AKTIPQ9H8T0 292 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 C3orf14Q9HBI5 128 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 UBQLN4Q9NRR5 601 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ACSS1Q9NUB1 689 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 RYDENQ9NUL5 291 aaKnown RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 PNPOQ9NVS9 261 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 NDRG3Q9UGV2 375 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ING1Q9UK53 422 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 MKLN1Q9UL63 735 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ICAM5Q9UMF0 924 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 EIF3LQ9Y262 564 aaKnown RBP7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF175Q9Y473 711 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 C2CD3Q4AC94 2353 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ACANP16112 2415 aa7.94□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF814B7Z6K7 855 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 NPIPB9F8W1W9 429 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF195O14628 629 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ADAMDEC1O15204 470 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 RAMP1O60894 148 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 NDUFS7O75251 213 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 SLITRK5O94991 958 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 CPSF4O95639 269 aaKnown RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 CHEK2O96017 543 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 IGHV3-9P01782 118 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 INHBBP09529 407 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 NEFHP12036 1026 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 PRKCAP17252 672 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 BGNP21810 368 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 NTF4P34130 210 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 PEX19P40855 299 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 SERPINB4P48594 390 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF41P51814 821 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 PSMD4P55036 377 aaKnown RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 FOXG1P55316 489 aaPredicted RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 RPS3AP61247 264 aaKnown RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ACKR1Q16570 336 aa7.93□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF239Q16600 458 aaKnown RBP7.93□□□□□ -1.14
HDAC3-211ENST00000491581 TMEM176BQ3YBM2 270 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms