RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SPATA19Q7Z5L4 167 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 SLC43A2Q8N370 569 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 METTL4Q8N3J2 472 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 TRPC4APQ8TEL6 797 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 MAGOHBQ96A72 148 aaKnown RBP11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 FAHD2AQ96GK7 314 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 RHOJQ9H4E5 214 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 COQ10BQ9H8M1 238 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 KLHL9Q9P2J3 617 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 MCM8Q9UJA3 840 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 GUCA1BQ9UMX6 200 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 LTA4HP09960 611 aaKnown RBP11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 IFNGR1P15260 489 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 SERPINF1P36955 418 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 FOXG1P55316 489 aaPredicted RBP11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 SLC25A3Q00325 362 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 SLC18A2Q05940 514 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 MGAT5Q09328 741 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 RASGEF1BQ0VAM2 473 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 RIN1Q13671 783 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 TMEM176BQ3YBM2 270 aaPredicted RBP11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 ZCCHC24Q8N2G6 241 aaKnown RBP11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 UBE2J2Q8N2K1 259 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 WDR31Q8NA23 367 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 ZNF75CPQ92670 426 aaPredicted RBP11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 SH3YL1Q96HL8 342 aaPredicted RBP11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 UBXN10Q96LJ8 280 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 CDK15Q96Q40 435 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 ATOH8Q96SQ7 321 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 RAB1BQ9H0U4 201 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 NARFLQ9H6Q4 476 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 AHSPQ9NZD4 102 aa11.92□□□□□ -0.5
EXOSC3-207ENST00000490516 ESPNB1AK53 854 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 PLOD3O60568 738 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 UGDHO60701 494 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 IGKV1D-16P01601 117 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 MSMBP08118 114 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 RBMXP38159 391 aaKnown RBP11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 IDH3GP51553 393 aaPredicted RBP11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 GALNT1Q10472 559 aaPredicted RBP11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 FOXF1Q12946 379 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 DLG1Q12959 904 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 GABRA6Q16445 453 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 FBXW9Q5XUX1 488 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 CCDC137Q6PK04 289 aaKnown RBP11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 ISCA2Q86U28 154 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 ZNF786Q8N393 782 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 L3MBTL4Q8NA19 623 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 RNF214Q8ND24 703 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 ATP6V1C2Q8NEY4 427 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 STAG3L4Q8TBR4 150 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 EXOSC8Q96B26 276 aaKnown RBP11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 IPPKQ9H8X2 491 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 DDX28Q9NUL7 540 aaKnown RBP11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 SENP1Q9P0U3 644 aa11.91□□□□□ -0.5
EXOSC3-207ENST00000490516 B9A039 149 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 BCL10O95999 233 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 NUDT17P0C025 328 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 LINGO3P0C6S8 592 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 MTHFD2P13995 350 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 PPOXP50336 477 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 GTF2H2Q13888 395 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 GTF2H2CQ6P1K8 395 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 GOLGA7Q7Z5G4 137 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 GALNT5Q7Z7M9 940 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 BPIFB2Q8N4F0 458 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 CLDND2Q8NHS1 167 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 ACTRT2Q8TDY3 377 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 WDR60Q8WVS4 1066 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 C22orf15Q8WYQ4 148 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 TAF15Q92804 592 aaKnown RBP eCLIP11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 TSPAN17Q96FV3 270 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 MUS81Q96NY9 551 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 FAIM2Q9BWQ8 316 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 TRIM5Q9C035 493 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 PLK3Q9H4B4 646 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 Q9N2J8 555 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 ACOT9Q9Y305 439 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 PCDHB14Q9Y5E9 798 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 TEX264Q9Y6I9 313 aa11.9□□□□□ -0.5
EXOSC3-207ENST00000490516 A0A1W2PNR3 127 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 GXYLT2A0PJZ3 443 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 ALG1L2C9J202 215 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 ZNF195O14628 629 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 CYTIPO60759 359 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 ESRRBO95718 433 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 PNPP00491 289 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 OR4A8P0C604 315 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 STMN1P16949 149 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 DDX5P17844 614 aaKnown RBP11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 ARL1P40616 181 aaPredicted RBP11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 PSMD4P55036 377 aaKnown RBP11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 FRG1Q14331 258 aaKnown RBP11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 ADIPOQQ15848 244 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 SGO1Q5FBB7 561 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 FRG2Q64ET8 278 aa11.89□□□□□ -0.51
EXOSC3-207ENST00000490516 VHLLQ6RSH7 139 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms