RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RIMS3Q9UJD0 308 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 OARD1Q9Y530 152 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 SF3B1O75533 1304 aaKnown RBP eCLIP2.81□□□□□ -1.962e-8■□□□□ 10.1
CD46-216ENST00000490278 TNRQ92752 1358 aa2.81□□□□□ -1.96
CD46-216ENST00000490278 SMIM28A0A1B0GU29 152 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 A0A1B0GWJ7 208 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 H3BMQ9 156 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 HDAC3O15379 428 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 NOL3O60936 208 aaKnown RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 LYPLA1O75608 230 aaPredicted RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 IDH1O75874 414 aaKnown RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 F10P00742 488 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 EPB41P11171 864 aaKnown RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 GCFC2P16383 781 aaKnown RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 DESP17661 470 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 VDAC1P21796 283 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 ACAA2P42765 397 aaKnown RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 DIO3P55073 304 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 RPS8P62241 208 aaKnown RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 OTUD4Q01804 1114 aaKnown RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 LAGE3Q14657 143 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 RABGAP1LQ5R372 815 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 WSCD1Q658N2 575 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 NCR3LG1Q68D85 454 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 FAHD2BQ6P2I3 314 aaPredicted RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 FRA10AC1Q70Z53 315 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 CEND1Q8N111 149 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 LINC01561Q8N1V8 128 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 C14orf178Q8N769 122 aaPredicted RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 C15orf54Q8N8G6 183 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 OR2A12Q8NGT7 310 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 ZNF564Q8TBZ8 553 aaPredicted RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 FGGYQ96C11 551 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 HAVCR1Q96D42 359 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 FAHD2AQ96GK7 314 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 C4orf36Q96KX1 117 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 CITED1Q99966 193 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 TEX13BQ9BXU2 312 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 NMUR2Q9GZQ4 415 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 EHD1Q9H4M9 534 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 FARSBQ9NSD9 589 aaKnown RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 IL17CQ9P0M4 197 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 WRAP73Q9P2S5 460 aaPredicted RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 LAMP5Q9UJQ1 280 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 ZNF256Q9Y2P7 627 aaPredicted RBP2.8□□□□□ -1.96
CD46-216ENST00000490278 GSTK1Q9Y2Q3 226 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 AP1M2Q9Y6Q5 423 aa2.8□□□□□ -1.96
CD46-216ENST00000490278 IGKV6D-41A0A0C4DH26 115 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 LOC100131303A0A0U1RQF7 123 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.79□□□□□ -1.96
CD46-216ENST00000490278 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.79□□□□□ -1.96
CD46-216ENST00000490278 FCN1O00602 326 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 TBL1XO60907 577 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 PEX11AO75192 247 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 UFL1O94874 794 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 KRT13P13646 458 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 ZNF19P17023 458 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 TPSB2P20231 275 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 TBXA2RP21731 343 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 GCKP35557 465 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 KIR2DS2P43631 304 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 EWSR1Q01844 656 aaKnown RBP eCLIP2.79□□□□□ -1.96
CD46-216ENST00000490278 RAB40BQ12829 278 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 TPSAB1Q15661 275 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 ZNF79Q15937 498 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 KYAT1Q16773 422 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 TIGITQ495A1 244 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 USH1GQ495M9 461 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 ZNF544Q6NX49 715 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 DNM1P46Q6ZS02 220 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 RAET1EQ8TD07 263 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 PHYHIPLQ96FC7 376 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 ZNF184Q99676 751 aaPredicted RBP2.79□□□□□ -1.96
CD46-216ENST00000490278 SLC6A7Q99884 636 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 TPPP3Q9BW30 176 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 RIBC2Q9H4K1 309 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 FANCFQ9NPI8 374 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.79□□□□□ -1.96
CD46-216ENST00000490278 ONECUT1Q9UBC0 465 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 ISY1Q9ULR0 285 aaKnown RBP2.79□□□□□ -1.96
CD46-216ENST00000490278 ABCG2Q9UNQ0 655 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 WDR45Q9Y484 360 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 MAB21L2Q9Y586 359 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 ZNF318Q5VUA4 2279 aa2.79□□□□□ -1.96
CD46-216ENST00000490278 ATP10DQ9P241 1426 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 PP2D1A8MPX8 630 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 TMEM110-MUSTN1A8MSY1 372 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 PPIAL4DF5H284 164 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 OR1F1O43749 312 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 SEMG1P04279 462 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 PCCBP05166 539 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 KRT8P05787 483 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 TSPY4P0CV99 314 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 TSPY10P0CW01 314 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 IGLL1P15814 213 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 PGCP20142 388 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 NMT1P30419 496 aaKnown RBP2.78□□□□□ -1.96
CD46-216ENST00000490278 PLA2G16P53816 162 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 STX17P56962 302 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 CSTF1Q05048 431 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms