RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CA4P22748 312 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 MARK3P27448 753 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PRDX3P30048 256 aaKnown RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 ACADSBP45954 432 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 BCAP31P51572 246 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 EFNB2P52799 333 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 YWHAGP61981 247 aaKnown RBP eCLIP2.56□□□□□ -2
UBXN4-208ENST00000490163 CX3CL1P78423 397 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PPP2R2BQ00005 443 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 ZNF415Q09FC8 603 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PNOCQ13519 176 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 CUL1Q13616 776 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 C16orf72Q14CZ0 275 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 CCL14Q16627 93 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PHKG1Q16816 387 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 FAM153CQ494X1 144 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 LYPLAL1Q5VWZ2 237 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 MPZL3Q6UWV2 235 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 ZNF66Q6ZN08 573 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 Q8N1X5 172 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 OR7G1Q8NGA0 311 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 WDR36Q8NI36 951 aaKnown RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 GPX8Q8TED1 209 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 NAT6Q93015 286 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 MCUR1Q96AQ8 359 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 MED30Q96HR3 178 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PSMB7Q99436 277 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 NPAS2Q99743 824 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 STRADBQ9C0K7 418 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 LRMDAQ9H2I8 198 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 TMEM185BQ9H7F4 350 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PSTPIP2Q9H939 334 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 SLC28A3Q9HAS3 691 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PKD2L2Q9NZM6 624 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PISDQ9UG56 409 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 RBMX2Q9Y388 322 aaKnown RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 SCN4AP35499 1836 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 COL4A5P29400 1685 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 COL27A1Q8IZC6 1860 aaPredicted RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 TIMM23O14925 209 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 RS1O15537 224 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 IDH3BO43837 385 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 GCATO75600 419 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 CDK2AP2O75956 126 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 PPP1R3DO95685 299 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 ANGPTL1O95841 491 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 SHBGP04278 402 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 SP1P08047 785 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 KITLGP21583 273 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 HOXD3P31249 432 aaPredicted RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 GSSP48637 474 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 TAS2R39P59534 338 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 SEC61GP60059 68 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 MED21Q13503 144 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 KIAA0141Q14154 515 aaPredicted RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 CHRNA6Q15825 494 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 SNAI3Q3KNW1 292 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 CCDC14Q49A88 953 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 XKR7Q5GH72 579 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 LIPJQ5W064 366 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 TTC23LQ6PF05 361 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 IZUMO2Q6UXV1 221 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 H2BFWTQ7Z2G1 175 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 SFR1Q86XK3 245 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 SRRM1Q8IYB3 904 aaKnown RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 TRIML2Q8N7C3 387 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 LINC00469Q8N7U9 141 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 LINC00301Q8NCQ3 95 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 OR6M1Q8NGM8 313 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 OR4A16Q8NH70 328 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 EXTL1Q92935 676 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 EFHD2Q96C19 240 aaPredicted RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 C4orf45Q96LM5 186 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 APOLD1Q96LR9 279 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 ZNF317Q96PQ6 595 aaPredicted RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 OR1F2PQ96R84 312 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 ADOQ96SZ5 270 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 RIOK1Q9BRS2 568 aaKnown RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 UBAC1Q9BSL1 405 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 WWP1Q9H0M0 922 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 TBC1D17Q9HA65 648 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 LYRM4Q9HD34 91 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 C12orf4Q9NQ89 552 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 GDF3Q9NR23 364 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 FGFR1OP2Q9NVK5 253 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 NDE1Q9NXR1 346 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 MTRF1LQ9UGC7 380 aaKnown RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 KIAA1257Q9ULG3 409 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 AMDHD2Q9Y303 409 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 UTP11Q9Y3A2 253 aaKnown RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 SCN9AQ15858 1988 aa2.56□□□□□ -2
UBXN4-208ENST00000490163 USP42Q9H9J4 1324 aaKnown RBP2.56□□□□□ -2
UBXN4-208ENST00000490163 IGHV3-20A0A0C4DH32 117 aa2.55□□□□□ -2
UBXN4-208ENST00000490163 ASPDHA6ND91 283 aa2.55□□□□□ -2
UBXN4-208ENST00000490163 GOLGA8JA6NMD2 632 aa2.55□□□□□ -2
UBXN4-208ENST00000490163 HAT1O14929 419 aa2.55□□□□□ -2
UBXN4-208ENST00000490163 SYNGR3O43761 229 aa2.55□□□□□ -2
UBXN4-208ENST00000490163 ENTPD5O75356 428 aa2.55□□□□□ -2
UBXN4-208ENST00000490163 TRIM3O75382 744 aaPredicted RBP2.55□□□□□ -2
UBXN4-208ENST00000490163 CIB2O75838 187 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms